New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2298183 =	27 (0.850)	4 (0.130)	4/234	NT	13.2%	coding (1982/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	2298208 =	27 (0.900)					coding (1957/3645 nt)	sbcC	exonuclease subunit SbcC

AGGCGACGCAGCTGGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGT  >  NC_002947/2298036‑2298329                                                                                                                                                    |                                                                                                                                                   cctgcccggtctgtggcagcgccgaacaccccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGc                                                                                                                                                  <  1:701185‑M1/3‑1 (MQ=255) cctgcccggtctgtggcagcgccgaacaccccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGc                                                                                                                                                  <  2:647832‑M1/3‑1 (MQ=255) aGGCGACGCAGCTGGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCACCTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGc                                                                                                                                                  >  1:475779/1‑150 (MQ=255)   tgcccggtctgtggcagcgccgaacaccccttccatcagacagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctgaacagcaagctggtggagctgcgtacccAGCTg                                                                                                                                                <  2:68602‑M1/5‑1 (MQ=255)    gcccggtctgtggcagcgccgaacaccccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTgg                                                                                                                                               >  2:569928‑M1/145‑150 (MQ=255)    cGACGCAGCTGGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTgg                                                                                                                                               <  2:126991/150‑1 (MQ=255)    cGACGCAGCTGGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTgg                                                                                                                                               <  2:127483/150‑1 (MQ=255)        gCAGCTAGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCAt                                                                                                                                           >  2:243294/1‑150 (MQ=255)              tggcagcgccgaacaccccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTgg                                                                                                                                               >  2:468665‑M1/135‑140 (MQ=255)              tggcagcgccgaacaccccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTgg                                                                                                                                               <  1:468665‑M1/6‑1 (MQ=255)                 tgTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGAc                                                                                                                                       >  1:286960/1‑145 (MQ=255)                 tgTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGAc                                                                                                                                       <  2:286960/145‑1 (MQ=255)                         cAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTgg                                                                                                                          <  2:792514/150‑1 (MQ=255)                         cAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTgg                                                                                                                          <  1:86256/150‑1 (MQ=255)                              cccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTACg                                                                                                                     <  2:391392‑M1/32‑1 (MQ=255)                                    ggCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTTGTTTGGGCATTGACCACACCCAGCTGGGTACGCAGcgc                                                                                                               >  1:180380/1‑148 (MQ=255)                                               ccTGCGGGGCGAGGGCTGGCCACAGGCTGTGCGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGc                                                                                                    <  1:608962/150‑1 (MQ=255)                                                cTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCt                                                                                                   <  1:243294/150‑1 (MQ=255)                                                     gggCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGa                                                                                              <  1:823093/150‑1 (MQ=255)                                                                          tgtgtgCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTg                                                                                                     >  1:448666/1‑122 (MQ=255)                                                                          tgtgtgCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTg                                                                                                     <  2:448666/122‑1 (MQ=255)                                                                                   gTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGct                                                                >  1:225792/1‑150 (MQ=255)                                                                                            ccaccaGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCt                                                       >  2:325640/1‑150 (MQ=255)                                                                                              accaGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTgg                                                     >  2:701185/1‑150 (MQ=255)                                                                                                caGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGc                                                                                <  2:326544/121‑1 (MQ=255)                                                                                                caGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGc                                                                                >  1:326544/1‑121 (MQ=255)                                                                                                  ccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTAc                                                                                                                      <  1:587968‑M1/31‑1 (MQ=255)                                                                                                  ccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTAc                                                                                                                      >  2:587968‑M1/51‑81 (MQ=255)                                                                                                          aaCTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGccc                                         >  2:538451/1‑150 (MQ=255)                                                                                                           aCTGTTCGCCCAGTCGCTGCTGCTGTGGCTGGAAGTCCTTGAGCTGGGAATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGTGGCCCa                                        <  1:161959/150‑1 (MQ=255)                                                                                                               ttCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGct                                    >  1:647832/1‑150 (MQ=255)                                                                                                                         cGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCagcagc                          <  1:325640/150‑1 (MQ=255)                                                                                                                          gctgctgctGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAgcg                         >  1:119352/1‑150 (MQ=255)                                                                                                                             caagctggtggagctgcgtacccAGCTGGGTGTGGTCAATGCCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGAGCtt                      <  1:391392‑M1/127‑1 (MQ=255)                                                                                                                                   gTTGCTGGAAGTCCTTGAGCTGGGGATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGGTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCt                <  2:348395/150‑1 (MQ=255)                                                                                                                                       cTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATg            >  1:308235/1‑150 (MQ=255)                                                                                                                                              tCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATggcggc                                           >  2:667792/1‑112 (MQ=255)                                                                                                                                              tCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATggcggc                                           <  1:667792/112‑1 (MQ=255)                                                                                                                                                 ttGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGgtgt  >  1:380795/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                   AGGCGACGCAGCTGGCTGTCGAGCCAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGT  >  NC_002947/2298036‑2298329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.