New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2298183 =	27 (0.850)	4 (0.130)	4/234	NT	13.2%	coding (1982/3645 nt)	sbcC	exonuclease subunit SbcC
	?	NC_002947	2298208 =	27 (0.900)					coding (1957/3645 nt)	sbcC	exonuclease subunit SbcC

CAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGG  >  NC_002947/2298060‑2298354                                                                                                                                                     |                                                                                                                                                   cAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTgg                                                                                                                                                   <  2:792514/150‑1 (MQ=255) cAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTgg                                                                                                                                                   <  1:86256/150‑1 (MQ=255)      cccttccatcagccagaagcgctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTACg                                                                                                                                              <  2:391392‑M1/32‑1 (MQ=255)            ggCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTTGTTTGGGCATTGACCACACCCAGCTGGGTACGCAGcgc                                                                                                                                        >  1:180380/1‑148 (MQ=255)                      aagctctgctgcagagcctgggccgccatgaccaggccgaagagcacgccgcccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccagctgggcattgaccacacccagctGGGTACGCAGCTCCACCAGCTTg                                                                                                                              <  1:391392‑M2/23‑1 (MQ=255)                       ccTGCGGGGCGAGGGCTGGCCACAGGCTGTGCGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGc                                                                                                                             <  1:608962/150‑1 (MQ=255)                        cTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCt                                                                                                                            <  1:243294/150‑1 (MQ=255)                             gggCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGa                                                                                                                       <  1:823093/150‑1 (MQ=255)                                                  tgtgtgCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTg                                                                                                                              >  1:448666/1‑122 (MQ=255)                                                  tgtgtgCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTg                                                                                                                              <  2:448666/122‑1 (MQ=255)                                                           gTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGct                                                                                         >  1:225792/1‑150 (MQ=255)                                                                    ccaccaGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCt                                                                                >  2:325640/1‑150 (MQ=255)                                                                      accaGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTgg                                                                              >  2:701185/1‑150 (MQ=255)                                                                        caGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGc                                                                                                         >  1:326544/1‑121 (MQ=255)                                                                        caGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGc                                                                                                         <  2:326544/121‑1 (MQ=255)                                                                          ccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTAc                                                                                                                                               <  1:587968‑M1/31‑1 (MQ=255)                                                                          ccagaagcaggtcgagacgctcaacagcaagctggtggagctgcgtacccAGCTGGGCATTGACCACACCCAGCTGGGTAc                                                                                                                                               >  2:587968‑M1/51‑81 (MQ=255)                                                                                  aaCTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGccc                                                                  >  2:538451/1‑150 (MQ=255)                                                                                   aCTGTTCGCCCAGTCGCTGCTGCTGTGGCTGGAAGTCCTTGAGCTGGGAATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGTGGCCCa                                                                 <  1:161959/150‑1 (MQ=255)                                                                                       ttCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGct                                                             >  1:647832/1‑150 (MQ=255)                                                                                                 cGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCagcagc                                                   <  1:325640/150‑1 (MQ=255)                                                                                                  gctgctgctGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAgcg                                                  >  1:119352/1‑150 (MQ=255)                                                                                                     caagctggtggagctgcgtacccAGCTGGGTGTGGTCAATGCCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGAGCtt                                               <  1:391392‑M1/127‑1 (MQ=255)                                                                                                           gTTGCTGGAAGTCCTTGAGCTGGGGATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGGTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCt                                         <  2:348395/150‑1 (MQ=255)                                                                                                               cTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATg                                     >  1:308235/1‑150 (MQ=255)                                                                                                                     cgtacccagctgggtgtggtcaatgcccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAggg                               <  2:391392‑M2/118‑1 (MQ=255)                                                                                                                      tCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATggcggc                                                                    <  1:667792/112‑1 (MQ=255)                                                                                                                      tCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATggcggc                                                                    >  2:667792/1‑112 (MQ=255)                                                                                                                      gtacccagctgggtgtggtcaatgcccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTgg                                                                                                   >  2:587968‑M2/32‑81 (MQ=255)                                                                                                                      gtacccagctgggtgtggtcaatgcccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTgg                                                                                                   <  1:587968‑M2/50‑1 (MQ=255)                                                                                                                         ttGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGgtgt                           >  1:380795/1‑150 (MQ=255)                                                                                                                              CTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTCCGgc                      >  1:774841‑M1/1‑150 (MQ=255)                                                                                                                                    aTTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAgcgc                                                 <  1:741841/117‑1 (MQ=255)                                                                                                                                    aTTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAgcgc                                                 >  2:741841/1‑117 (MQ=255)                                                                                                                                        aCCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAggg                               <  1:708702/131‑1 (MQ=255)                                                                                                                                        aCCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAg            >  2:238682/1‑150 (MQ=255)                                                                                                                                        aCCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAg            >  1:239035/1‑150 (MQ=255)                                                                                                                                        aCCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTATTCGGCCTTGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAggg                               >  2:708702/1‑131 (MQ=255)                                                                                                                                            cacCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCg        <  1:144602/150‑1 (MQ=255)                                                                                                                                             acCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCgg       <  2:717434/150‑1 (MQ=255)                                                                                                                                               ccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCca               >  2:468665‑M2/7‑140 (MQ=255)                                                                                                                                               ccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCca               <  1:468665‑M2/134‑1 (MQ=255)                                                                                                                                               ccagctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGc     >  2:569928‑M2/7‑150 (MQ=255)                                                                                                                                                cagctGGGTACGCAGCTCCACCAGCTTGCTGTTCAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGTCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCa    <  2:68602‑M2/145‑1 (MQ=255)                                                                                                                                                  gctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAgg  <  1:701185‑M2/147‑1 (MQ=255)                                                                                                                                                  gctGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAgg  <  2:647832‑M2/147‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                   CAGGCGCTACGGGCCTTGTCGTCCTGCGGGGCGAGGGCTGGCCACAGGCTGTGTGCCTGTACCTGAGCCACCAGCGGTTGCAACTGTTCGCCCAGTCGCTGCTGCTGTTGCTGGAAGTCCTTGAGCTGGGCATTGACCACACCCAGCTGGGTACGCAGCTCCACCAGCTTGCTGTTGAGCGTCTCGACCTGCTTCTGGGCGGCGTGCTCTTCGGCCTGGTCATGGCGGCCCAGGCTCTGCAGCAGCGCTTCTGGCTGATGGAAGGGGTGTTCGGCGCTGCCACAGACCGGGCAGG  >  NC_002947/2298060‑2298354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.