New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2311645 =	26 (0.820)	3 (0.100)	3/232	NT	11.0%	coding (1254/1260 nt)	PP_2034	membrane protein
	?	NC_002947	2311674 =	24 (0.810)					coding (1225/1260 nt)	PP_2034	membrane protein

CCTGAAGGGCTTGCGCAACAGTGTGCTTGATGTGCTGTTCGTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGCATCCAGCCGAACGCC  >  NC_002947/2311510‑2311789                                                                                                                                        |                                                                                                                                                 ccTGAAGGGCTTGCGCAACAGTGTGCTTGATGTGCTGTTCGTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCCGGCCTACAGAGCGCGCGCCAGCTg                                                                                                                                    >  2:231344/1‑150 (MQ=255)   tGAAGGGCTTGCGCAACAGTGTGCTTGATGTGCTGTTCGTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGtt                                                                                                                                  <  1:236208/150‑1 (MQ=255)                 aaCAGTGTGCTTGATGTGCTGTTCGTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCtt                                                                                                                    >  2:379970/1‑150 (MQ=255)                                         gTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGcc                                                                                            >  2:307693/1‑150 (MQ=255)                                         gTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGcc                                                                                            >  2:244289/1‑150 (MQ=255)                                          tCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAg                                                                                                                               >  1:725528/1‑114 (MQ=255)                                          tCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAg                                                                                                                               <  2:725528/114‑1 (MQ=255)                                            aaTCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAgg                                                                                         >  2:256472/1‑150 (MQ=255)                                              tCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGt                                                                                       >  1:769784/1‑150 (MQ=255)                                                  ccGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTcagc                                                                                   <  1:256472/150‑1 (MQ=255)                                                    ccaacgggattttcgtcgcatcggtggtgttcatgctgctgacggtgctgctgaccctggcacaggagatgtattcagccagaaGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTg                                                                                                                 >  2:763688‑M1/85‑118 (MQ=255)                                                    ccaacgggattttcgtcgcatcggtggtgttcatgctgctgacggtgctgctgaccctggcacaggagatgtattcagccagaaGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTg                                                                                                                 <  1:763688‑M1/34‑1 (MQ=255)                                                            gcgggcgCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATTCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTca                                                                         >  2:502841/1‑150 (MQ=255)                                                                           aTGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAAcacca                                                          >  1:400480/1‑150 (MQ=255)                                                                           aTGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAAcacca                                                          >  2:382797/1‑150 (MQ=255)                                                                             gCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTAGAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACaccacc                                                        >  2:554530/1‑150 (MQ=255)                                                                               cAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAGTACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGa                                                      >  1:814392/1‑150 (MQ=255)                                                                               cAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGa                                                      >  1:718258/1‑150 (MQ=255)                                                                                        gcAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTTTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTTCCAGGGTCAGCAGCACCGTCACCAGCATGAACACCACCGATGCGACGaa                                             >  2:186269/1‑150 (MQ=255)                                                                                              aatgaCTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGaa                                                                                                           <  1:508603/82‑1 (MQ=255)                                                                                              aatgaCTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGaa                                                                                                           >  2:508603/1‑82 (MQ=255)                                                                                               atgaCTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCg                                      <  1:379970/150‑1 (MQ=255)                                                                                               atgaCTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCg                                      <  1:244289/150‑1 (MQ=255)                                                                                                    tGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTggg                                 <  2:814392/150‑1 (MQ=255)                                                                                                          tggcctggcAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTc                                                                          >  2:155985/1‑103 (MQ=255)                                                                                                          tggcctggcAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTc                                                                          <  1:155985/103‑1 (MQ=255)                                                                                                                    ggagatgtattcagccagaaGGCGCGCGACTGAACAGCTGGCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGc                 <  2:179010‑M1/130‑1 (MQ=255)                                                                                                                       ttgtACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGCATc              <  2:769784/150‑1 (MQ=255)                                                                                                                         gtACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGCATCCa            <  1:231344/150‑1 (MQ=255)                                                                                                                                   tACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGCATCCAGCCGAACGcc  >  2:352224/1‑150 (MQ=255)                                                                                                                                        |                                                                                                                                                 CCTGAAGGGCTTGCGCAACAGTGTGCTTGATGTGCTGTTCGTCAATCGGCCGGGGGCAGGCGGGCGCGTGGTGCATGCCAACCCGGCGCAATGAATGACTGATCCTGGCCTGGCAATGTTGTACCGGGCCTACAGGGCGCGCGCCAGCTGTTCAGTCGCGCGCCTTCTGGCTGAATACATCTCCTGTGCCAGGGTCAGCAGCACCGTCAGCAGCATGAACACCACCGATGCGACGAAAATCCCGTTGGGCAGGCGCTGATCGAGCATCCAGCCGAACGCC  >  NC_002947/2311510‑2311789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.