New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2726286 =	20 (0.630)	6 (0.200)	6/236	NT	20.7%	coding (413/1083 nt)	PP_2387	hypothetical protein
	?	NC_002947	2726323 =	27 (0.900)					coding (376/1083 nt)	PP_2387	hypothetical protein

AGCGACTGCCGACGAGGTGGTGCGCAGGGCTGCATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGT  >  NC_002947/2726139‑2726433                                                                                                                                                    |                                                                                                                                                    gcggctccacagccctgggcatcggcgccagctccgacgaacacacagtggcctcgcacctgtcgatgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGc                                                                                                                                                   <  1:826774‑M1/3‑1 (MQ=255) gcggctccacagccctgggcatcggcgccagctccgacgaacacacagtggcctcgcacctgtcgatgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGc                                                                                                                                                   <  1:708719‑M1/3‑1 (MQ=255)      cTGCCGACGAGGTGGTGCGCAGGGCTGCATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGcaccac                                                                                                                                              <  2:763787/150‑1 (MQ=255)           gacgaGGTGGTGCGCAGGGCTGCATGCCTTCGATAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGTTACCTGCGACGACTTCCCCTAGGGCTTCGTGGGCCAGGCCGTTGAGGCCACTGAGCCCCACCACAt                                                                                                                                         <  2:127626/150‑1 (MQ=255)            acgaGGTGGTGCGCAGGGCTGCATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATg                                                                                                                                        <  1:824654/150‑1 (MQ=255)                          aGGGCTGCATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCaa                                                                                                                          <  2:336917/150‑1 (MQ=255)                               gctccgacgaacacacagtggcctcgcacctgtcgatgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGCACCACCACATGGCCGAGTTGGCCAAGGCgg                                                                                                                     >  2:826774‑M1/118‑150 (MQ=255)                                       gaacacacagtggcctcgcacctgtcgatgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCtggtg                                                                                                             <  2:785812‑M1/41‑1 (MQ=255)                                        cccacacactggccacacagctgtgcatgctcgcgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCtggtgg                                                                                                            >  2:397199‑M1/109‑150 (MQ=255)                                                        gaAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACAtcatca                                                                                            >  1:219494/1‑150 (MQ=255)                                                           aGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAAtt                                                                                         >  1:649029/1‑150 (MQ=255)                                                                  atgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccA‑‑‑‑‑‑CCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTggg                                                                                                           >  1:183781‑M1/83‑119 (MQ=255)                                                                  atgctcacgggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccA‑‑‑‑‑‑CCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTggg                                                                                                           <  2:183781‑M1/37‑1 (MQ=255)                                                                          gggcgaagtctggctgagcctggccggctgcgggctgaacgccacccaggaattgatgatgttcctgacccaccAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCa                                                                          >  1:785812‑M1/75‑150 (MQ=255)                                                                               tgctgcGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCg                                                                     <  1:401582/150‑1 (MQ=255)                                                                                        tCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGcc                                                            >  2:277729/1‑150 (MQ=255)                                                                                                                 acaGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCa                                                                          >  2:794389/1‑111 (MQ=255)                                                                                                                 acaGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCa                                                                          <  1:794389/111‑1 (MQ=255)                                                                                                                     ggCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGtt                                                                            >  1:74266/1‑105 (MQ=255)                                                                                                                     ggCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGtt                                                                            <  2:74266/105‑1 (MQ=255)                                                                                                                      gCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATc                              <  1:277729/150‑1 (MQ=255)                                                                                                                        ttCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAAt                                                                                          >  1:431533/1‑88 (MQ=255)                                                                                                                        ttCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAAt                                                                                          <  2:431533/88‑1 (MQ=255)                                                                                                                              ggCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTg                      >  1:759044/1‑150 (MQ=255)                                                                                                                                   ggCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCGGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAgg                 <  2:566240/150‑1 (MQ=255)                                                                                                                                       gTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTc                                           <  2:6198/120‑1 (MQ=255)                                                                                                                                       gTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTc                                           >  1:6198/1‑120 (MQ=255)                                                                                                                                       gTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCAc             >  2:413700/1‑150 (MQ=255)                                                                                                                                               cACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGtt     >  2:132799/1‑150 (MQ=255)                                                                                                                                                aCTGAGCACCACCACATGGCCGAGTTGGCCCAGGCGGTTCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTtc    >  2:423614/1‑150 (MQ=255)                                                                                                                                                aCTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTtc    <  1:413700/150‑1 (MQ=255)                                                                                                                                                  tGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTtcgt  >  2:47439/1‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                    AGCGACTGCCGACGAGGTGGTGCGCAGGGCTGCATGCCTTCGCTAAAACTGTTGAGAAAGGCCTGGTAGGCCTTGGCGTGCTGCGGGTCGTTGGTACCTGCGAGGACTTCACACAGGGCTTCGTGGGCCAGGCTGTTGAGGCCACTGAGCACCACCACATGGCCGAGTTGGCCAAGGCGGTGCTGGTGGGTCAGGAACATCATCAATTCCTGGGTGGCGTTCAGCCCGCAGCCGGCCAGGCTCAGCCAGACTTCGCCCGTGAGCATCGACAGGTGCGAGGCCACTGTGTGTTCGT  >  NC_002947/2726139‑2726433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.