New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2981446 =	37 (1.170)	3 (0.100)	3/236	NT	7.7%	coding (962/1734 nt)	PP_2607	hypothetical protein
	?	NC_002947	2981502 =	37 (1.230)					coding (906/1734 nt)	PP_2607	hypothetical protein

CTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGCCTGCTGCGAATCCTCCCATG  >  NC_002947/2981310‑2981595                                                                                                                                         |                                                                                                                                                      cTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGgccctc                                                                                                                                          <  1:765703/150‑1 (MQ=255)          gAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGgc                                                                                                                                 >  1:443540/1‑150 (MQ=255)             gcgcCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGgctgc                                                                                                                              >  2:231023/1‑150 (MQ=255)                        tttGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCt                                                                                                                   <  2:698066/150‑1 (MQ=255)                             tCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCa                                                                                                                                                 <  2:415151/115‑1 (MQ=255)                             tCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCa                                                                                                                                                 >  1:415151/1‑115 (MQ=255)                                 ccGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTATTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGgc                                                                                                          <  2:251700/150‑1 (MQ=255)                                       tCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAggg                                                                                                    >  1:190814/1‑150 (MQ=255)                                        cgccatgggaggattcgcagcaggcgcaatggccgccgactaccgcccggctcaaaaggcgccgcacctgaccctgtcaccaccggccaacgacggaGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGggc                                                                                                   >  1:477392‑M1/98‑150 (MQ=255)                                         aCGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGggcg                                                                                                  <  1:227787/150‑1 (MQ=255)                                             ccGGCTTGGCGCGGTCTGTGACCAGGTGCGTGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTc                                                                                              >  1:794986/1‑150 (MQ=255)                                             ccGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTc                                                                                              <  2:443540/150‑1 (MQ=255)                                             ccGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTc                                                                                              >  1:198163/1‑150 (MQ=255)                                             ccGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTAGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTc                                                                                              >  2:582328/1‑150 (MQ=255)                                                    gacgcgGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGtt                                                                                       >  2:17567/3‑150 (MQ=255)                                                      cgcgGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTgg                                                                                     >  2:770173/1‑150 (MQ=255)                                                       gcgGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGc                                                                                    <  2:645484/150‑1 (MQ=255)                                                           tCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCggt                                                                                <  1:770173/150‑1 (MQ=255)                                                             tgtgACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCggtgg                                                                              >  1:701539/1‑150 (MQ=255)                                                             tgtgACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCggtgg                                                                              >  2:305406/1‑150 (MQ=255)                                                                                taccgcccggctcaaaaggcgccgcacctgaccctgtcaccaccggccaacgacggaGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCcgtc                                                                                          >  1:483508‑M1/58‑119 (MQ=255)                                                                                taccgcccggctcaaaaggcgccgcacctgaccctgtcaccaccggccaacgacggaGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCcgtc                                                                                          <  2:483508‑M1/62‑1 (MQ=255)                                                                                   tCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGcc                                                        >  2:848148/1‑150 (MQ=255)                                                                                         tCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTTCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGa                                                  <  2:360979/150‑1 (MQ=255)                                                                                               tCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCggg                                            <  2:794986/150‑1 (MQ=255)                                                                                                  gCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCggtggt                                                                             >  1:803692/1‑114 (MQ=255)                                                                                                  gCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCggtggt                                                                             <  2:803692/114‑1 (MQ=255)                                                                                                  gCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGt                                                                >  1:803225/1‑127 (MQ=255)                                                                                                  gCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGt                                                                <  2:803225/127‑1 (MQ=255)                                                                                                    aTGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTTACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTa                                       <  1:690659/150‑1 (MQ=255)                                                                                                         gTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTcgg                                  >  2:708887/1‑150 (MQ=255)                                                                                                                   aaCCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTgc                        <  1:17567/150‑1 (MQ=255)                                                                                                                      cGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGcc                     >  2:579169/1‑150 (MQ=255)                                                                                                                        gTGCCCAGAAGAAGTTGGCCGCCAGGCTCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTgc                        <  2:789608/145‑1 (MQ=255)                                                                                                                        gTGCCCAGAAGAAGTTGGCCGCCAGGCTCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTgc                        >  1:789608/1‑145 (MQ=255)                                                                                                                              agaagaAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTgcggc                                                           >  2:687537/1‑104 (MQ=255)                                                                                                                              agaagaAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTgcggc                                                           <  1:687537/104‑1 (MQ=255)                                                                                                                              agaagaAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCtt                                                      <  1:597605/109‑1 (MQ=255)                                                                                                                              agaagaAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCtt                                                      >  2:597605/1‑109 (MQ=255)                                                                                                                                 agaagTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGCCTGCTGCGAAtc          <  2:198163/150‑1 (MQ=255)                                                                                                                                      ttGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGCCTGCTGCGAATCCTccc     >  1:424012/1‑150 (MQ=255)                                                                                                                                         GCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGCCTGCTGCGAATCCTCCCATg  >  1:579169‑M1/1‑150 (MQ=255)                                                                                                                                         |                                                                                                                                                      CTCGTTGACGAAGCGCCGCCCGGTTTGGTCTACCGCAATCACGCCCGGCTTGGCGCGGTCTGTGACCAGGTGCGGGAAGCGCTCACGTTCACCATCGGCATGACGTAGTTCGGAAACCGGTGCCCAGAAGAAGTTGGCCGCCAGGCCCTCGCCCTCGGCTGCTGCCACGGCCTGGGCAAGGCGCAGGGCGGCTCCGTCGTTGGCCGGTGGTGACAGGGTCAGGTGCGGCGCCTTTTGAGCCGGGCGGTAGTCGGCGGCCATTGCGCCTGCTGCGAATCCTCCCATG  >  NC_002947/2981310‑2981595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.