New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3679054	32 (1.010)	4 (0.130)	4/240	NT	11.4%	coding (108/510 nt)	PP_3243	GNAT family acetyltransferase
	?	NC_002947	= 3679064	31 (1.010)					coding (98/510 nt)	PP_3243	GNAT family acetyltransferase

GCGCACCGATATTTCATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCA  >  NC_002947/3678907‑3679192                                                                                                                                                    |                                                                                                                                            gcgcACCGATATTTCATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTg                                                                                                                                           >  1:619067/1‑150 (MQ=255)     aCCGATATTTCATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑gcc                                                                                                                                      >  2:234170/1‑150 (MQ=255)               cATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAgccaggcca                                                                                                                            <  2:619067/150‑1 (MQ=255)                           aTGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAAc                                                                                                                <  2:412990/150‑1 (MQ=255)                                      gCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGcc                                                                                                     >  2:755111/1‑150 (MQ=255)                                      gCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGcc                                                                                                     >  2:347532/1‑150 (MQ=255)                                       ccAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCt                                                                                                    >  1:153026/1‑150 (MQ=255)                                           ccGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGc                                                                                                <  1:755111/150‑1 (MQ=255)                                               gcgcAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGcc                                                                                            <  1:617941/150‑1 (MQ=255)                                                    ggCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcg                                                                                       <  1:678349/150‑1 (MQ=255)                                                               caATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCg                                                                            <  2:617877/150‑1 (MQ=255)                                                                  tGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCa                                                                         <  2:809119/150‑1 (MQ=255)                                                                         aGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGt                                                                  <  1:347532/150‑1 (MQ=255)                                                                         aGTCGCGTCCTGCGCCACCCAACTA‑CCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTg                                                                 >  1:81597/1‑150 (MQ=255)                                                                           tCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGa                                                                >  1:809632/1‑150 (MQ=255)                                                                              cgTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGt                                                             <  1:353754/150‑1 (MQ=255)                                                                               gTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTGGCTGGC‑GCAaggcgacgtcatggattgcgc                                                                                                             >  2:718113‑M2/1‑80 (MQ=255)                                                                               gTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTGGC‑TGGCGCAaggcgacgtcatggattgcgc                                                                                                             <  1:718113‑M2/101‑22 (MQ=255)                                                                                tCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCt                                                           >  2:849329/1‑150 (MQ=255)                                                                                    gcgcCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGtt                                                       <  2:623685/150‑1 (MQ=255)                                                                                        cACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAg                                                   <  1:849329/150‑1 (MQ=255)                                                                                        cACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCAAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAg                                                   <  1:255209/150‑1 (MQ=255)                                                                                                   ccccTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGa                                        >  1:791517/1‑150 (MQ=255)                                                                                                         ccTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCa                                  >  2:827025/1‑150 (MQ=255)                                                                                                          cTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCAt                                 <  1:234170/150‑1 (MQ=255)                                                                                                           tCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTggctggcgcaaggcga                                                                                                                             >  1:570860‑M1/1‑42 (MQ=255)                                                                                                           tCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTggctggcgcaaggcga                                                                                                                             <  2:570860‑M1/58‑17 (MQ=255)                                                                                                              acgaAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAAt                             <  2:791517/150‑1 (MQ=255)                                                                                                                gaAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCa                           >  1:380347/1‑150 (MQ=255)                                                                                                                  aaGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcgc                                                                                      >  1:183005/1‑89 (MQ=255)                                                                                                                  aaGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcgc                                                                                      <  2:183005/89‑1 (MQ=255)                                                                                                                     cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCgg                                                                           <  2:3983/97‑1 (MQ=255)                                                                                                                     cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCgg                                                                           >  1:3983/1‑97 (MQ=255)                                                                                                                     cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAgg                                                  >  1:782966/1‑122 (MQ=255)                                                                                                                     cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAgg                                                  <  2:782966/122‑1 (MQ=255)                                                                                                                             gccgcGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCt              <  1:827025/150‑1 (MQ=255)                                                                                                                                gcgcAATCCATGACGTCGCCTtgcgccagccaggcgacgtcatggattgcgcggcgcacagggctttcgtcgaggcagggggtagttgggtggcgcaggac                                                             >  2:718113‑M1/1‑21 (MQ=255)                                                                                                                                gcgcAATCCATGACGTCGCCTtgcgccagccaggcgacgtcatggattgcgcggcgcacagggctttcgtcgaggcagggggtagttgggtggcgcaggac                                                             <  1:718113‑M1/101‑81 (MQ=255)                                                                                                                                         aTGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGACCACCTGACAAAAGCCTGGGCTGCCGACCACTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCAATCCTGTCGTTCTAATCCGTCGCCa  >  2:97438/1‑150 (MQ=255)                                                                                                                                               tCGCCTTGC‑GCCAGCCaggcgacgtcatggattgcgcggcgcacagggctttcgtcga                                                                                        <  2:570860‑M2/58‑43 (MQ=255)                                                                                                                                               tCGCCTTGC‑GCCAGCCaggcgacgtcatggattgcgcggcgcacagggctttcgtcga                                                                                        >  1:570860‑M2/1‑16 (MQ=255)                                                                                                                                                    |                                                                                                                                            GCGCACCGATATTTCATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCA  >  NC_002947/3678907‑3679192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.