New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3679054	32 (1.010)	4 (0.130)	4/240	NT	11.4%	coding (108/510 nt)	PP_3243	GNAT family acetyltransferase
	?	NC_002947	= 3679064	31 (1.010)					coding (98/510 nt)	PP_3243	GNAT family acetyltransferase

CATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCAGCACCTGCGGCTGTAATTGCC  >  NC_002947/3678921‑3679213                                                                                                                                                 |                                                                                                                                                      cATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAgccaggcca                                                                                                                                                 <  2:619067/150‑1 (MQ=255)             aTGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAAc                                                                                                                                     <  2:412990/150‑1 (MQ=255)                        gCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGcc                                                                                                                          >  2:755111/1‑150 (MQ=255)                        gCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGcc                                                                                                                          >  2:347532/1‑150 (MQ=255)                         ccAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCt                                                                                                                         >  1:153026/1‑150 (MQ=255)                             ccGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGc                                                                                                                     <  1:755111/150‑1 (MQ=255)                                 gcgcAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGcc                                                                                                                 <  1:617941/150‑1 (MQ=255)                                      ggCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcg                                                                                                            <  1:678349/150‑1 (MQ=255)                                                 caATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCg                                                                                                 <  2:617877/150‑1 (MQ=255)                                                    tGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCa                                                                                              <  2:809119/150‑1 (MQ=255)                                                           aGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGt                                                                                       <  1:347532/150‑1 (MQ=255)                                                           aGTCGCGTCCTGCGCCACCCAACTA‑CCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTg                                                                                      >  1:81597/1‑150 (MQ=255)                                                             tCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGa                                                                                     >  1:809632/1‑150 (MQ=255)                                                                cgTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGt                                                                                  <  1:353754/150‑1 (MQ=255)                                                                 gTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTGGCTGGC‑GCAaggcgacgtcatggattgcgc                                                                                                                                  >  2:718113‑M2/1‑80 (MQ=255)                                                                 gTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTGGC‑TGGCGCAaggcgacgtcatggattgcgc                                                                                                                                  <  1:718113‑M2/101‑22 (MQ=255)                                                                  tCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCt                                                                                >  2:849329/1‑150 (MQ=255)                                                                      gcgcCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGtt                                                                            <  2:623685/150‑1 (MQ=255)                                                                          cACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAg                                                                        <  1:849329/150‑1 (MQ=255)                                                                          cACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCAAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAg                                                                        <  1:255209/150‑1 (MQ=255)                                                                                     ccccTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGa                                                             >  1:791517/1‑150 (MQ=255)                                                                                           ccTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCa                                                       >  2:827025/1‑150 (MQ=255)                                                                                            cTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCAt                                                      <  1:234170/150‑1 (MQ=255)                                                                                                acgaAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAAt                                                  <  2:791517/150‑1 (MQ=255)                                                                                                  gaAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCa                                                >  1:380347/1‑150 (MQ=255)                                                                                                    aaGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcgc                                                                                                           >  1:183005/1‑89 (MQ=255)                                                                                                    aaGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAgcgc                                                                                                           <  2:183005/89‑1 (MQ=255)                                                                                                       cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCgg                                                                                                >  1:3983/1‑97 (MQ=255)                                                                                                       cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCgg                                                                                                <  2:3983/97‑1 (MQ=255)                                                                                                       cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAgg                                                                       <  2:782966/122‑1 (MQ=255)                                                                                                       cccTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAgg                                                                       >  1:782966/1‑122 (MQ=255)                                                                                                               gccgcGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCt                                   <  1:827025/150‑1 (MQ=255)                                                                                                                           aTGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGACCACCTGACAAAAGCCTGGGCTGCCGACCACTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCAATCCTGTCGTTCTAATCCGTCGCCa                       >  2:97438/1‑150 (MQ=255)                                                                                                                                 tCGCCTTGC‑GCCAGCCaggcgacgtcatggattgcgcggcgcacagggctttcgtcga                                                                                                             <  2:570860‑M2/58‑43 (MQ=255)                                                                                                                                 tCGCCTTGC‑GCCAGCCaggcgacgtcatggattgcgcggcgcacagggctttcgtcga                                                                                                             >  1:570860‑M2/1‑16 (MQ=255)                                                                                                                                           gccagccaGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCAGCACCTGCGGCTGTa        >  2:791818/1‑150 (MQ=255)                                                                                                                                                 caggccagTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCAGCACCTGCGGCTGTAATTGcc  >  1:163510/1‑150 (MQ=255)                                                                                                                                                 |                                                                                                                                                      CATGAAGGTGCAATGCCTGATCCGCCAGCCGGGCGCAGGCAAAACCCACAATGCGCCCAGTCGCGTCCTGCGCCACCCAACTACCCCCTGCCTCGACGAAAGCCCTGTGCGCCGCGCAATCCATGACGTCGCCTTGC‑GCCAGCCAGGCCAGTGCCGGCCAACTGACAAAAGCCTGGGCTGCCGAGCGCTCGACGTCCGGCAGCCACGTGATGTCTGGTTCAAGGGTAGGGCGGATAAGCATGAATCACTCCTGTCGTTCTAATCCGTCGCCAGCACCTGCGGCTGTAATTGCC  >  NC_002947/3678921‑3679213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.