| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4022323 = | 35 (1.110) | 7 (0.240) | 4/232 | NT | 19.0% | coding (27/942 nt) | PP_3547 | NAD(P)‑binding oxidoreductase |
| ? | NC_002947 | 4022416 = | 27 (0.910) | intergenic (‑67/+601) | PP_3547/emrB | NAD(P)‑binding oxidoreductase/multidrug transporter permease | |||||
GAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGAT > NC_002947/4022175‑4022457 | gcgaaccgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggcgagtcactttttgtcaaacgcgacaaaaagtaaccaaaaaacgctgcgctcccatcatccggcccctgcgctgcgctccggggttccctcactccgg < 1:27388‑M1/2‑1 (MQ=255) agggaaCATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGcc > 2:424268/1‑150 (MQ=255) accgtccgtttgcgatggcgacgctgactcaccttttcgcccttacggcgagtcactttttgtcaaacgcaacaaaaaaaaaaaaaaaaacgctgcgctcccatcatccggcccctgcgctgcgctccggggttccctcactccGGCCtt > 2:26943‑M1/145‑150 (MQ=255) tttgcgatggcgacgctgactcaccttttcgcccttacggcgagtcactttttgtcaaacgcgacaaaaagtaaccaaaaaacgctgcgctccaacaatgcttgcgcgtcgctgcgctccggggttccctcactccGGCCTTGCGGAGGc < 2:450790‑M1/14‑1 (MQ=255) aaTAGCAGAAATCGCGATGCGGTGGAAGGGGTAGCATCAGCACAGCCAGCGCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGCTCTTGATCTTCATCTACGCGACTTCAGGCGGCCGAACGCAGGCCTTGCGGAGGCAgg > 2:270105/1‑150 (MQ=21) cTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGc < 2:264767/150‑1 (MQ=255) tGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGcc > 2:751221/1‑150 (MQ=255) gCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGccc < 1:427547/150‑1 (MQ=255) tGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGa > 2:695265/1‑117 (MQ=255) tGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGa < 1:695265/117‑1 (MQ=255) tGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATATGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAgcgc > 1:452683/1‑150 (MQ=255) gACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:431492/150‑1 (MQ=255) gACGAACATCAGCACAGCCAACCCTCTGCTTTTGATATGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:452683/150‑1 (MQ=255) ttacggcgagtcactttttgtcaaacgcgacaaaaagtaaccaaaaaacgctgcgctcccatcatcaggcccctgcgctgcgctccggggttccctcactccGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAg < 1:603740‑M1/48‑1 (MQ=255) aTCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGccc < 1:759023/150‑1 (MQ=255) gCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATg < 1:263612/122‑1 (MQ=255) gCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATg > 2:263612/1‑122 (MQ=255) gCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAg > 2:272882/1‑142 (MQ=255) gCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAg < 1:272882/142‑1 (MQ=255) gCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATggg < 1:751221/150‑1 (MQ=255) aaCCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGcc > 2:698536/1‑150 (MQ=255) aaCCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGcc > 2:681511/1‑150 (MQ=255) tcaaacgcgacaaaaagtaaccaaaaaacgctgcgctcccatcatccggcccctgcgctgcgctccggggttccctcactccGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTTTTGCGGTGAGGCCCCA‑GGATGGGGCCTTCg > 1:450790‑M1/83‑150 (MQ=255) tGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATgg > 1:555112/1‑139 (MQ=255) tGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATgg < 2:555112/139‑1 (MQ=255) ggcttttgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGACgg > 2:264622/1‑150 (MQ=255) cttttgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGa < 1:698536/150‑1 (MQ=255) tgatctggcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCaa < 1:424268/150‑1 (MQ=38) aaaaacgctgcgctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAagc > 2:312878‑M1/60‑149 (MQ=255) aaacgctgcgctcacatcatccggcccctgcgctgcgctccggggtcccctcactccGGCCTTGCGGCGGGTGTTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGcc > 1:825619‑M1/58‑150 (MQ=255) aacgctgcgctcccatcatccggcccctgcgctgcgctccggggtcccctcactcaGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCg > 2:345065‑M1/57‑150 (MQ=255) gcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATg < 2:254077/86‑1 (MQ=35) gcttttgatctTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATg > 1:254077/1‑86 (MQ=35) cgctcccatcatcaggcccctgcgctgcgctccggggttccctcactccGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAg > 2:603740‑M1/50‑150 (MQ=255) cttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGaa < 1:139666/150‑1 (MQ=31) ttgatcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAc > 2:442778/1‑150 (MQ=32) ttgatcttgatcttgatcttCGCGACGTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAc > 1:297707/1‑150 (MQ=17) atcttgatcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAAcccc > 2:773625/1‑150 (MQ=32) ttgatcttgatcttCGCGACTGCAGGAGGCCGAACGCAGGCCTTGCGGAGGAAGGTGACGGGCATGGATGCCGGTCAAGCGCTGAGGCGCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGa < 2:628696/150‑1 (MQ=255) tcttgatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGagcgc > 2:557158/1‑150 (MQ=32) gatcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGTGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGagcgcagcg > 1:213696/1‑150 (MQ=17) tcttCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAgcgcagcgca > 2:551177/1‑150 (MQ=32) tCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAggg < 1:681511/150‑1 (MQ=32) aggaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGgatgat < 1:442778/150‑1 (MQ=32) aggaggCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGAAACCCCGGAGCGCAGCGCAGGGGCCGgatgat < 2:166410/150‑1 (MQ=17) | GAAGGGAACATCGACAATAGGCGAAATCGCGCTGCGTTGGAATGACGAACATCAGCACAGCCAACCCTCTGCTTTTGATCTGGCTTTTGATCTGGCTTTTGATCTTGATCTTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAGGCCGGAGTGAGGGAACCCCGGAGCGCAGCGCAGGGGCCGGATGAT > NC_002947/4022175‑4022457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |