| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5116432 | 26 (0.820) | 4 (0.140) | 4/232 | NT | 12.8% | coding (532/594 nt) | PP_4501 | septation protein A |
| ? | NC_002947 | = 5116448 | 30 (1.010) | coding (548/594 nt) | PP_4501 | septation protein A | |||||
CCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGGCG > NC_002947/5116283‑5116564 | ccATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGC < 1:470776‑M1/150‑1 (MQ=255) gACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCgt < 1:833269/150‑1 (MQ=255) cgcCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTAc < 2:701663/150‑1 (MQ=255) tcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCgcgc < 1:803990‑M2/131‑5 (MQ=255) tcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCgcgc > 2:803990‑M2/1‑127 (MQ=255) tcCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCtt > 1:693985/1‑150 (MQ=255) aaCCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGAt > 2:722932/1‑150 (MQ=255) aaCCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGAt < 1:541289/150‑1 (MQ=255) aaCCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGAGCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGAt < 1:696864/150‑1 (MQ=255) aCCTGGTCGTCTCCTTCACCTTCCAGGACTTCTGAGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCCCCTGCACGATGACTCAACTACCTCCTTCCCCATGGAtt < 2:847316/150‑1 (MQ=255) gTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgcca > 2:91509‑M1/1‑86 (MQ=255) gTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgcca < 1:91509‑M1/108‑23 (MQ=255) gCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGAGCGTGATCTTACTGTTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATCACCTTTCTATCTCCAAACCCAAGGTTTGACATGCTCTa > 2:326302/1‑150 (MQ=255) cTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACg > 1:343486/1‑150 (MQ=255) tCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATc < 2:836998/150‑1 (MQ=255) ttCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAc < 1:775857/104‑1 (MQ=255) ttCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAc > 2:775857/1‑104 (MQ=255) tGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGt < 2:693985/150‑1 (MQ=255) gTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCCCTACGCCATTATCGCCAGCGACCTCGc > 2:556468/1‑150 (MQ=255) tGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgccacca > 2:759061‑M1/1‑54 (MQ=255) tGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCgacaggtacacgccttgcgccacca < 1:759061‑M1/79‑26 (MQ=255) tGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGACGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCa > 2:384116/1‑150 (MQ=255) aaGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAGGCCGTGTCCCTGTCGCGCTACATGCACGATATCCCTTCTACCTCCCAACCCAAGGATTGACATGCTCTACTCCATTATCGCCAGCGACGTCGCAAACTCCCt < 2:524339/150‑1 (MQ=255) aaGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCt < 2:343486/150‑1 (MQ=255) aGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTa < 1:546007/116‑1 (MQ=255) aGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTa > 2:546007/1‑116 (MQ=255) gCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAgcgc < 2:775181/150‑1 (MQ=255) ccAGCCTGGGCATGGCGGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCACGCCACCTGCACGCTGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAgcgc > 2:80105/2‑150 (MQ=255) gCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTg > 1:743297/1‑150 (MQ=255) gCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGACGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTg < 1:384116/150‑1 (MQ=255) aTGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAACTCCAAACCCAAGGATTGACATGCTCTa > 2:204758/1‑96 (MQ=255) aTGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTAACTCCAAACCCAAGGATTGACATGCTCTa < 1:204758/96‑1 (MQ=255) tGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGgcg > 1:3167/1‑150 (MQ=255) tggtggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtcca > 2:759061‑M2/1‑25 (MQ=255) tggtggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtcca < 1:759061‑M2/79‑55 (MQ=255) tggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaac < 1:91509‑M2/108‑87 (MQ=255) tggCGCAAGGCGTGTACCTGTCgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaac > 2:91509‑M2/1‑22 (MQ=255) gcgcgacaggtacacgccttgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacaggttggccgcgccgcagaacagga > 2:803990‑M1/1‑4 (MQ=255) gcgcgacaggtacacgccttgcgccaccaggaagatcacggtcatgcccaggctgccgaacaccttgaagtccacccagaagtcctggaaggtgaaggcgacgaacaggttggccgcgccgcagaacagga < 1:803990‑M1/131‑128 (MQ=255) | CCATCTGGACGCGCCTGAATCTGGCCTGGATCGCTTTCTTCCTGTTCTGCGGCGCGGCCAACCTGTTCGTCGCCTTCACCTTCCAGGACTTCTGGGTGGACTTCAAGGTGTTCGGCAGCCTGGGCATGACCGTGATCTTCCTGGTGGCGCAAGGCGTGTACCTGTCGCGCCACCTGCACGATGACCCTTCTACCTCCAAACCCAAGGATTGACATGCTCTACGCCATTATCGCCAGCGACGTCGCAAACTCCCTGGAAAAGCGCCTGGCCGCCCGCCCGGCG > NC_002947/5116283‑5116564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |