New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5734099 = | 36 (1.140) | 4 (0.140) | 4/218 | NT | 11.3% | intergenic (‑69/+88) | proY/hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
? | NC_002947 | 5734152 = | 31 (1.110) | intergenic (‑122/+35) | proY/hutH | proline (histidine) APC transporter/histidine ammonia‑lyase |
GTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGT > NC_002947/5733951‑5734248 | gTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTGTCTGTGGTCGGTAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACg > 1:828716/1‑150 (MQ=255) tGCCGATGGCGGAGCCGAGGGCCATGAAACGTAGGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTCTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGgcgcgc > 1:284823/1‑150 (MQ=255) gcactacgaccgtgaccgtttcttcgcgccggatatcgaaaaggccgtggacctgttggccaagggtagtctgaccggcttgctgccggcgggtgtactgccaagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgcgc > 1:411179‑M1/148‑150 (MQ=255) tacgaccgtgaccgtttcttcgcgccggatatcgaaaaggccgtggacctgttggccaagggtagtctgaccggcttgctgccggcgggtgtactgccaagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGc > 2:276207‑M1/144‑150 (MQ=255) ccgtgaccgtttcttcgcgccggatatcgaaaaggccgtggacctgttggccaagggtagtctgaccggcttgctgccggcgggtgtactgccaagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGCTCCca > 2:222664‑M1/139‑150 (MQ=255) aGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAg < 2:597888/150‑1 (MQ=255) cATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGgtgt > 2:749453/1‑150 (MQ=255) tGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGttt > 1:470059/1‑150 (MQ=255) ccggatatcgaaaaggccgtggacctgttggccaagggtagtctgaccggcttgctgccggcgggtgtactgccaagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgcgc < 1:646657‑M1/3‑1 (MQ=255) ccggatatcgaaaaggccgtggacctgttggccaagggtagtctgaccggcttgctgccggcgggtgtactgccaagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgcgc > 2:646657‑M1/120‑122 (MQ=255) aCGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGCCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCa > 2:518546/1‑150 (MQ=255) ggCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCtgtg > 2:811439/1‑150 (MQ=255) gCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTgg < 1:749453/150‑1 (MQ=255) aCTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCGCGTCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGa < 2:284823/150‑1 (MQ=255) ttAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGGATGGTCTTTTGCATCTTCGTTTGTGGGAGc > 2:689053/1‑150 (MQ=255) ttAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGc > 2:91203/1‑150 (MQ=255) cTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGccc > 1:90180/1‑150 (MQ=255) ttgttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGCGCGGGCGCGCCCGCGAAGGGCCGCCCa > 1:292399/1‑150 (MQ=255) gttgCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGc < 2:470059/150‑1 (MQ=255) gttgCATGTCACGCCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGc < 1:518546/150‑1 (MQ=255) gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGTGCACGCCCGCTCCCTCAGGGGATGGTGTTTTGCACCTACTTCTCGGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc < 1:67698/150‑1 (MQ=255) gTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGc < 1:67644/150‑1 (MQ=255) cTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgg < 2:553016/144‑1 (MQ=255) cTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAgg > 1:553016/1‑144 (MQ=255) cTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGtt > 2:691434/1‑150 (MQ=255) cTTGAATTGTTTTTGTGGTCGTGAGAGTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCACCGGCCCCAgagtcggt > 1:210773/1‑143 (MQ=255) ttGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTa > 2:591976/1‑150 (MQ=255) tGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTAc < 1:689053/150‑1 (MQ=255) aaTTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAg > 2:786041/1‑150 (MQ=255) ttGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGAGTTACAGGCTTGGCa < 2:828716/150‑1 (MQ=255) caagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTgg > 1:32351‑M1/47‑90 (MQ=255) caagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTgg < 2:32351‑M1/44‑1 (MQ=255) aagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACtt > 2:335723‑M1/46‑83 (MQ=255) aagcctgtaacgcccctggggccgctgggcggcccttcgcgggcgCGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACtt < 1:335723‑M1/38‑1 (MQ=255) gTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTaca < 1:786041/150‑1 (MQ=255) gTGAGATTCAGGGGGCTGCGGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACAccc > 1:457564/1‑150 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgccgc > 2:330527/1‑99 (MQ=255) ggggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGgccgc < 1:330527/99‑1 (MQ=255) gggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAggg > 2:338748/1‑94 (MQ=255) gggCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAggg < 1:338748/94‑1 (MQ=255) ctgctgCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg < 1:591976/150‑1 (MQ=255) ctgctgCGCACTCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCg < 1:557899/150‑1 (MQ=255) ctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAg > 1:216973/1‑116 (MQ=255) ctgcGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAg < 2:216973/116‑1 (MQ=255) ccccTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg < 2:387203/114‑1 (MQ=255) ccccTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTgg > 1:387203/1‑114 (MQ=255) tCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTgg > 1:193723/1‑150 (MQ=255) gcccGCCCGCTCCCACAGGGGATGGTGTTTGGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa < 2:292399/147‑1 (MQ=255) gCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACa < 1:811439/150‑1 (MQ=255) CGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGt > 1:91203‑M1/1‑150 (MQ=255) | GTGCCGATGGCGGAGCCGAGGGCCATGAAACGGATGTGGCGGGCACTTAGCCCGCGCTTGAGACCTTGAGCTTGTTGCATGTCACGTCCTTGAATTGTTTTTGTGGTCGTGAGATTCAGGGGGCTGCTGCGCAGCCCCTTCGCGGGCACGCCCGCTCCCACAGGGGATGGTGTTTTGCACCTACTTCTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCCCAGCGGCCCCAGGGGCGTTACAGGCTTGGCAGTACACCCGCCGGCAGCAAGCCGGTCAGACTACCCTTGGCCAACAGGT > NC_002947/5733951‑5734248 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |