New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5877975	21 (0.660)	4 (0.130)	4/236	NT	16.3%	coding (67/903 nt)	PP_5151	hypothetical protein
	?	NC_002947	= 5878001	21 (0.700)					coding (41/903 nt)	PP_5151	hypothetical protein

GTCAGCGCCGAAATGTCATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATGCAAGCGTCAGGCAATTCT  >  NC_002947/5877827‑5878121                                                                                                                                                     |                                                                                                                                                   ggcAGCGCCGAAATGTCATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCg                                                                                                                                                   <  1:115037/148‑1 (MQ=255) gTCAGCGCCGAAATGTCATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCg                                                                                                                                                   <  2:264804/150‑1 (MQ=255)       gcCGAAATGTCATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAg                                                                                                                                             >  1:366193/1‑150 (MQ=255)           aaaTGTCATCATCCACTCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCACAGCCaa                                                                                                                                         <  2:127104/150‑1 (MQ=255)                 catcatCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAagcagca                                                                                                                                   <  2:366193/150‑1 (MQ=255)                  atcatcCAGCCCTTCGATCGGTTGCCCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCttgctctgctgctgcttg                                                                                                                                  >  1:331552‑M1/1‑132 (MQ=255)                      tcCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACCCCTGCCCGGCCCAGCCAAGCAGCAGCaga                                                                                                                              >  1:594754/1‑150 (MQ=255)                         aGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCa                                                                                                                           >  1:500713/1‑150 (MQ=255)                              ttCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCttgctctgctgctgcttggctgggccgggc                                                                                                                      <  2:331552‑M1/150‑31 (MQ=255)                                              tCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAAc                                                                                                      >  2:769697/1‑150 (MQ=255)                                                      caccCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAAc                                                                                              >  2:747991/1‑150 (MQ=255)                                                                  aTCCAGGCCAATGCTGCACTCCACAGGCTGGCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCAt                                                                                  >  1:130672/1‑150 (MQ=255)                                                                   tCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATa                                                                                 >  2:667078/1‑150 (MQ=255)                                                                    ccAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAg                                                                                <  2:500713/150‑1 (MQ=255)                                                                                tgcGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCttgctctgctgctgcttggctgggccgggcagg                                                                                                                   <  1:802008‑M1/103‑34 (MQ=255)                                                                                tgcGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCttgctctgctgctgcttggctgggccgggcagg                                                                                                                   >  2:802008‑M1/1‑70 (MQ=255)                                                                                tgcGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGa                                                                    <  1:769697/150‑1 (MQ=255)                                                                                       cacaGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAgg                                                             <  2:260799/150‑1 (MQ=255)                                                                                         caGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCCAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGAt                                                           <  2:428592/150‑1 (MQ=255)                                                                                                    caGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAAACTaa                                                >  2:382922/1‑150 (MQ=255)                                                                                                        tCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCAt                                            >  2:631023/1‑150 (MQ=255)                                                                                                        gcTTGAGAGTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACTCAAGGATGGCGAATCTAATCAt                                            <  2:130672/149‑1 (MQ=255)                                                                                                                             gCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTa                       >  1:436114/1‑150 (MQ=255)                                                                                                                                      ggCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATGCAAGCg              >  1:156193/1‑150 (MQ=255)                                                                                                                                       gCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAAGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATGCAAGCGt             >  2:852499/1‑150 (MQ=255)                                                                                                                                             cTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGa                                                                             >  1:763989/1‑80 (MQ=255)                                                                                                                                             cTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGa                                                                             <  2:763989/80‑1 (MQ=255)                                                                                                                                               ccTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAgggcaggagtttcgcctgttcgagcgtggctggttcaatctcaagacctggtggcagcctgtggagcgca                                                    <  1:802008‑M2/103‑71 (MQ=255)                                                                                                                                               ccTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAgggcaggagtttcgcctgttcgagcgtggctggttcaatctcaagacctggtggcagcctgtggagcgca                                                    >  2:802008‑M2/1‑33 (MQ=255)                                                                                                                                                 tGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATg                    >  1:556132/1‑133 (MQ=255)                                                                                                                                                 tGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATg                    <  2:556132/133‑1 (MQ=255)                                                                                                                                                  gCCCGGCCCAGCCAAGCAGCAGCAGAGCAAgggcaggagtttcgcctgttcgagcgtggctggttcaatctcaagacctggtggcagcctgtggagcgcagcattggcctggatcgctaccgggtggtgctggaggcgcaaccgatcgaa  <  2:331552‑M2/150‑121 (MQ=255)                                                                                                                                                     |                                                                                                                                                   GTCAGCGCCGAAATGTCATCATCCAGCCCTTCGATCGGTTGCGCCTCCAGCACCACCCGGTAGCGATCCAGGCCAATGCTGCGCTCCACAGGCTGCCACCAGGTCTTGAGATTGAACCAGCCACGCTCGAACAGGCGAAACTCCTGCCCGGCCCAGCCAAGCAGCAGCAGAGCAAGGGCAGCCAGAACAAGGAACAGGCGAACAAAACGACGCATAGGGACAGACTCGACACAAGGATGGCGAATCTAATCATGAATGGCTGAAGCAAAGCTTAATGCAAGCGTCAGGCAATTCT  >  NC_002947/5877827‑5878121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.