New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1497637	33 (1.040)	4 (0.130)	3/234	NT	10.6%	coding (218/636 nt)	PP_1310	hypothetical protein
	?	NC_002947	= 1497672	36 (1.200)					coding (253/636 nt)	PP_1310	hypothetical protein

CCCAACCCGGTCCAGGGCGGCACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGA  >  NC_002947/1497525‑1497805                                                                                                                                                    |                                                                                                                                      cccAACCCGGTCCAGGGCGGCACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGtg                                                                                                                                     <  1:140382‑M2/150‑3 (MQ=255)         ggTCCAGGGCGGCACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGc                                                                                                                             <  1:756722/150‑1 (MQ=255)              aGGGCGGCACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAgg                                                                                                                        >  1:221392/1‑150 (MQ=255)                 gcggcACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCg                                                                                                                     >  2:794241/1‑150 (MQ=255)                 gcggcACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCg                                                                                                                     >  2:379071/1‑150 (MQ=255)                 gcggcACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCg                                                                                                                     >  2:205484/1‑150 (MQ=255)                        cATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTgcagc                                                                                                              >  1:666280/1‑150 (MQ=255)                                  aaGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGt                                                                                                    <  2:666280/150‑1 (MQ=255)                                                  tGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGc                                                                                    >  2:455025/1‑150 (MQ=255)                                                  tGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGc                                                                                    >  1:610847/1‑150 (MQ=255)                                                    cAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTa                                                                                  <  2:140382/150‑1 (MQ=255)                                                                 gTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGa                                                                     >  1:516062/1‑150 (MQ=255)                                                                          gTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCtttt                                                            >  1:392536/1‑150 (MQ=255)                                                                               gtgACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttcgttc                                                       >  2:647545/1‑150 (MQ=255)                                                                                tgACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttcgttcg                                                      <  1:794241/150‑1 (MQ=255)                                                                                tgACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttcgttcg                                                      <  1:379071/150‑1 (MQ=255)                                                                                  aCCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGTGCTGGCGAAGt                                                                                                                                      <  2:458383‑M2/68‑2 (MQ=255)                                                                                  aCCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGTGCTGGCGAAGt                                                                                                                                      >  1:458383‑M2/1‑67 (MQ=255)                                                                                    ccTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCggtgg                                                  >  2:467913/1‑150 (MQ=255)                                                                                          tttCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttcgttc                                                       >  1:720736/1‑139 (MQ=255)                                                                                          tttCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttcgttc                                                       <  2:720736/139‑1 (MQ=255)                                                                                          tttCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttc                                                           <  1:633701/135‑1 (MQ=255)                                                                                          tttCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTttc                                                           >  2:633701/1‑135 (MQ=255)                                                                                           ttCAACTACCGTGGCGTCGGGCAGAGCGCCGGCAGCCACGAGTTGGGCGCTGGCGAAGTCGCCGATGGCGAGACCGCTGCAGCATGGCTGCAGGCCAGGCAAACCGGGCTACCGCTGGTGCTGATGGGCTTGTCGTTCGGTGGTTTCGtt                                           <  2:316574/150‑1 (MQ=255)                                                                                              aaCTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGtt                                           >  1:371400/1‑147 (MQ=255)                                                                                              aaCTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGtt                                           <  2:371400/147‑1 (MQ=255)                                                                                              aaCTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGcc                                        >  2:504923/1‑150 (MQ=255)                                                                                                               cgagagcgCCGGCAGCCACGACATGGGCGCTGGCGAAGtggccgacgccacggtagttgaaacgcagggtcacataaccggcatcacgtgcggtgcgctgcagggtc                                                                  <  1:325268‑M2/105‑70 (MQ=255)                                                                                                               ccAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGtggccgacgccacggtagttgaaacgcagggtcacataaccggcatcacgtgcggtgcgctgcagggtc                                                                  >  2:325268‑M2/1‑38 (MQ=255)                                                                                                               ccAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGgcg                       >  2:764847/1‑150 (MQ=255)                                                                                                                 agagCGCCGGCAGCCACGACATGGGCGCTGGCGAAGtggccgacgccacggtagttgaaacgcagggtcacataaccggcatcacgtgcggtgcgctgcagggtcgagaccaccttgtt                                                    >  2:613800‑M2/1‑36 (MQ=255)                                                                                                                 agagCGCCGGCAGCCACGACATGGGCGCTGGCGAAGtggccgacgccacggtagttgaaacgcagggtcacataaccggcatcacgtgcggtgcgctgcagggtcgagaccaccttgtt                                                    <  1:613800‑M2/119‑84 (MQ=255)                                                                                                                 agagCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGcc                     <  1:196690/150‑1 (MQ=255)                                                                                                                   agCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCtt                   <  2:610847/150‑1 (MQ=255)                                                                                                                    gcgcCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGc                                         <  1:212759/127‑1 (MQ=255)                                                                                                                    gcgcCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGc                                         >  2:212759/1‑127 (MQ=255)                                                                                                                     cgcCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGa                 >  2:14776/1‑150 (MQ=255)                                                                                                                       gccgacgCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGaaa               <  1:182217/144‑1 (MQ=255)                                                                                                                               cACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGaaa               >  2:575666/1‑142 (MQ=255)                                                                                                                               cACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGaaa               <  1:575666/142‑1 (MQ=255)                                                                                                                                  gACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTc    <  2:516062/150‑1 (MQ=255)                                                                                                                                   aCATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCg   >  2:102736/1‑150 (MQ=255)                                                                                                                                    cATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGa  <  1:455025/150‑1 (MQ=255)                                                                                                                                    cATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGa  <  1:14776/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                      CCCAACCCGGTCCAGGGCGGCACCATGCTCAACAAGGTGGTCTCGACCCTGCAGCGCACCGCACGTGATGCCGGTTATGTGACCCTGCGTTTCAACTACCGTGGCGTCGGCCAGAGCGCCGGCAGCCACGACATGGGCGCTGGCGAAGTGGCCGATGCCGAGGCCGCTGCAGCATGGCTGCGTGCCAGGCACCCCGGGCTACCGCTGGTGCTGATGGGCTTTTCGTTCGGTGGTTTCGTTGCCACCAGCCTGGCCGGGCGCCTTGAAACTGCAGGCGTCGA  >  NC_002947/1497525‑1497805

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.