New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2048837 =	27 (0.850)	4 (0.150)	4/214	NT	19.9%	intergenic (+33/+106)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein
	?	NC_002947	2048928 =	9 (0.330)					intergenic (+124/+15)	PP_1821/PP_1822	glutathione S‑transferase family protein/hypothetical protein

CGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGG  >  NC_002947/2048779‑2049070                                                                                                                                                      |                                                                                                                                                cgcgGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAggg                                                                                                                                                 <  1:296951/150‑1 (MQ=255)  gcgGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAAGCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGa                                                                                                                                                <  2:565558/150‑1 (MQ=255)     gCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCt                                                                                                                                             <  2:441953/150‑1 (MQ=255)                                            aGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGt                                                                                                     <  1:228339/150‑1 (MQ=255)                                              gcgcTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTaa                                                                                                   >  2:513003/1‑150 (MQ=255)                                                 cTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAg                                                                                                       >  1:105866/1‑143 (MQ=255)                                                 cTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAg                                                                                                       <  2:105866/143‑1 (MQ=255)                                                             TTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTg                                                                                    >  1:340733‑M1/1‑150 (MQ=255)                                                             TTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTg                                                                                    >  2:467786‑M1/1‑150 (MQ=255)                                                                         gcgagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggGATATGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCga                                                                                               >  1:493798‑M2/78‑127 (MQ=255)                                                                         gcgagcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggGATATGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCga                                                                                               <  2:493798‑M2/50‑1 (MQ=255)                                                                             gcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa                                                                                  >  2:752324‑M2/74‑136 (MQ=255)                                                                             gcccgcgaagcaggcaccgcggtggttggcacgggctgcgcccgtgttcgcgggcacgcccgctcccacaaggGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGa                                                                                  <  1:752324‑M2/63‑1 (MQ=255)                                                                                       tcGGGCGCAGCCCGTGCCAACCACCGCGGGGACTACTTCGTGAGCCCGGCCCTTGACCAATGGGTGTTGTAGCATTAGT‑GAGAGGGCGGCAAACCGCTCCGTCAGGAAAGCGATCATTTCTCTGGACTTATACATCTAGGTCACCTTccc                                                          >  2:145017/2‑150 (MQ=255)                                                                                            cgcAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCGCGTTAG‑TCACAAACACTTGTACAGATAGCGGCAAGCCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                                                     <  1:195843/150‑1 (MQ=255)                                                                                            cgcAGCCAGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGctt                                                     <  2:467239/150‑1 (MQ=255)                                                                                                   cGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAAt                                              <  1:513003/150‑1 (MQ=255)                                                                                                          accaccGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGAGTCATACATCCAGGTCACCTTGTCGGCTTCTTCAATGCGCAgg                                       >  2:311864/1‑150 (MQ=255)                                                                                                                                               cacaaggGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAggg  >  1:631986‑M2/8‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                CGCGGCATGTGCCGATGGTGGGCTGAAAACCGACCTGTTTTCCAGGCGCTTGCGCAATCCTTGTGGGAGCGGGCGTGCCCGCGAACACGGGCGCAGCCCGTGCCAACCACCGCGGTGCCTGCTTCGCGGGCTCGCCCGCTCCCACAAGGGATCTGCAGCGTCAGT‑CAGATGGCGGCAAACCGCTCATCCAGGTAAGCGATGATTGCCTTGGACTCATACATCCAGGTCACCTTGCCGGCTTCTTCAATGCGCAGGCATGGCACTTTCACCCGGCCGCCACCTTCCTGCAGGG  >  NC_002947/2048779‑2049070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.