New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2807755	21 (0.660)	4 (0.130)	4/238	NT	14.8%	coding (68/213 nt)	PP_2461	hypothetical protein
	?	NC_002947	= 2807768	26 (0.860)					coding (55/213 nt)	PP_2461	hypothetical protein

TTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAGGCGGGATGCGCTCCACTTCTTGCAGCAAA  >  NC_002947/2807630‑2807913                                                                                                                                           |                                                                                                                                                  ttGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCgg                                                                                                                                        <  2:738329/150‑1 (MQ=255) ttGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCgg                                                                                                                                        <  2:573005/150‑1 (MQ=255)           cgcgTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCGTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGAc                                                                                                                              <  1:750309/150‑1 (MQ=255)           cgcgTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGAc                                                                                                                              <  1:547994/150‑1 (MQ=255)               tGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGGGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTg                                                                                                                          <  2:602072/150‑1 (MQ=255)                        tAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCa                                                                                                                 <  2:591319/150‑1 (MQ=255)                          gcgcTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGATTTATTGCGATCAGAAACAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATc                                                                                                               <  1:278080/150‑1 (MQ=255)                             cTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGAt                                                                                                            <  1:241793/150‑1 (MQ=255)                                gAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCt                                                                                                         <  2:279413/150‑1 (MQ=255)                                    acCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTgg                                                                                                     <  2:238533/150‑1 (MQ=255)                                                            gccTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAg                                                                             <  1:693589/150‑1 (MQ=255)                                                                        ttGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACg                                                                 <  2:544570/150‑1 (MQ=255)                                                                           tCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAag                                                              >  1:388087/1‑150 (MQ=255)                                                                              cggaCCAACAGGTCGATGGCGATCAGCAGCAACTCTCAGTCGGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAaggag                                                           <  1:225505/147‑1 (MQ=255)                                                                              cgcACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAaggag                                                           <  2:713499/150‑1 (MQ=255)                                                                                           cGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGAccc                                              >  2:123982/1‑150 (MQ=255)                                                                                             aTGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTg                                            <  1:330814/150‑1 (MQ=255)                                                                                                   aTCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTc                                      <  1:117978/150‑1 (MQ=255)                                                                                                          gcaACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAg                               >  1:665719/1‑150 (MQ=255)                                                                                                          gcaACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAg                               >  2:621676/1‑150 (MQ=255)                                                                                                                          gCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGaa                                                               <  1:267066/102‑1 (MQ=255)                                                                                                                          gCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGaa                                                               >  2:267066/1‑102 (MQ=255)                                                                                                                           ccAGGGCTGTACGCGCTctggcacaccggaagagttgctgctgatcgccatcgacctgttggtgcgcgacaacggtgccgaggc                                                                                >  2:746388‑M2/1‑17 (MQ=255)                                                                                                                           ccAGGGCTGTACGCGCTctggcacaccggaagagttgctgctgatcgccatcgacctgttggtgcgcgacaacggtgccgaggc                                                                                <  1:746388‑M2/84‑68 (MQ=255)                                                                                                                           ccAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGgt                                          >  2:102456/1‑122 (MQ=255)                                                                                                                           ccAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGAGGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGgt                                          <  1:102456/122‑1 (MQ=255)                                                                                                                            cAGGGCTGTACGCGCTctggcacaccggaagagttgctgctgatcgccatcgacctgttg                                                                                                       >  2:170816‑M2/1‑16 (MQ=255)                                                                                                                            cAGGGCTGTACGCGCTctggcacaccggaagagttgctgctgatcgccatcgacctgttg                                                                                                       <  1:170816‑M2/60‑45 (MQ=255)                                                                                                                             aGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACCAAGGAGGAACACCTGACCCTGGTGTTCGATGGAGGCGGGATGCGCTCCActtc            <  1:22076/150‑1 (MQ=255)                                                                                                                                gCTGTACGCGTTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAGGCGGGATGCGCTCCACTTCTTg         <  1:358676/150‑1 (MQ=255)                                                                                                                                       gcgcTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAGGCGGGATGCGCTCCACTTCTTGCAGCaaa  >  1:376658/1‑150 (MQ=255)                                                                                                                                           |                                                                                                                                                  TTGGAATAGCCGCGTGCGGCGCGTAGCGCTCGAACACCTGGTCGATGAAGCTGCGTGCCGCCTCGGCACCGTTGTCGCGCACCAACAGGTCGATGGCGATCAGCAGCAACTCTTCCGGTGTGCCAGGGCTGTACGCGCTCTGGCCCTCGGCCCATTTGACCTTGATGTCGGCATCGATGCTGTGGGTGCTCATGAAAAGCTCTCGCTAGGGGCCCGGAACGAAGGAGGAACACCTGACCCTGGTGTTCGATGGAGGCGGGATGCGCTCCACTTCTTGCAGCAAA  >  NC_002947/2807630‑2807913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.