New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2876327 =	39 (1.230)	4 (0.130)	4/236	NT	11.1%	coding (77/258 nt)	PP_2530	hypothetical protein
	?	NC_002947	2876371 =	27 (0.900)					coding (33/258 nt)	PP_2530	hypothetical protein

CATGCCGCCGGGAGGTGGCGGTGGTCATGGTGGGGGTGGCCACGGCGGTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTCGCCACCCCAAACGGTACATG  >  NC_002947/2876223‑2876520                                                                                                                                                     |                                                                                                                                                      ccgacgtgaagcaggatcaactgccgatcagcgcatcatcctgcatgccctaaggcgcaaacaccggcgctgtgccacgcgcggttcgggcgaccaatgtgcatGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCAt                                                                                                                                                      >  2:602173‑M1/105‑150 (MQ=255)        ccgGGAGGTGGCGGTGGTCATGGTGGGGGTGGCCACGGCGGTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACAtt                                                                                                                                               <  1:471011/150‑1 (MQ=255)                           aTGGTGGGGGTGGCCACGGCGGTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGt                                                                                                                            >  1:25584/1‑150 (MQ=255)                             ggtggGGGTGGCCACGGCGGTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTgg                                                                                                                          >  1:133077/1‑150 (MQ=255)                                              cggTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTg                                                                                                         <  1:175999/150‑1 (MQ=255)                                                 tggtTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTACGGTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTgcgc                                                                                                      <  1:45731/150‑1 (MQ=255)                                                    ttttGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCtt                                                                                                   >  1:236132/1‑150 (MQ=255)                                                          tggCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCa                                                                                             >  1:415414/1‑150 (MQ=255)                                                           ggCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCAt                                                                                            >  1:772994/1‑150 (MQ=255)                                                           aaacaccggcgctgtgccacgcgcggttcgggcgaccaatgtgcatGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGca                                                                                                                                                   <  2:690099‑M1/49‑1 (MQ=255)                                                           aaacaccggcgctgtgccacgcgcggttcgggcgaccaatgtgcatGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGca                                                                                                                                                   >  1:690099‑M1/47‑95 (MQ=255)                                                                      tGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGgt                                                                                                              >  1:163855/1‑121 (MQ=255)                                                                      tGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGgt                                                                                                              <  2:163855/121‑1 (MQ=255)                                                                      tGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGatgatg                                                                                 <  2:236132/150‑1 (MQ=255)                                                                          ggcCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCa                                                                                                                                                       <  1:414570/76‑1 (MQ=255)                                                                          ggcCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCa                                                                                                                                                       >  2:414570/1‑76 (MQ=255)                                                                                cgcTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGatgatg                                                                                 <  1:825989/140‑1 (MQ=255)                                                                                cgcTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGatgatg                                                                                 >  2:825989/1‑140 (MQ=255)                                                                                     aGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGtt                                                                  <  2:509321/150‑1 (MQ=255)                                                                                         gACCCCTCGATGGACCGCGCCCTCTCGGCCGGGTCGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTTTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATc                                                              <  2:420992/150‑1 (MQ=255)                                                                                          aCCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGca                                                                                                                                                   <  1:325847/64‑1 (MQ=255)                                                                                          aCCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGca                                                                                                                                                   >  2:325847/1‑64 (MQ=255)                                                                                            cccGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCCTGCAGCCTGATGCGCTGATCCGCAGTTGATCCTg                                                           >  2:67168/1‑150 (MQ=255)                                                                                             ccGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGc                                                          <  1:67168/150‑1 (MQ=255)                                                                                               gcgATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCtt                                                        <  2:133077/150‑1 (MQ=255)                                                                                                    tgcatgcgcccgtgccgggtacgcgcttgcaacccggccgagagggcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGttt                                                                                                          <  2:690099‑M2/46‑1 (MQ=255)                                                                                                    tgcatgcgcccgtgccgggtacgcgcttgcaacccggccgagagggcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGttt                                                                                                          >  1:690099‑M2/50‑95 (MQ=255)                                                                                                       atgcgcccgtgccgggtacgcgcttgcaacccggccgagagggcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCgg                                                >  2:602173‑M2/47‑150 (MQ=255)                                                                                                         gcgcccgtgccgggtacgcgcttgcaacccggccgagagggcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGt                                              <  1:602173‑M2/106‑1 (MQ=255)                                                                                                              CTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTg                                         <  1:63415‑M1/150‑1 (MQ=255)                                                                                                               tctcGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGa                                        >  1:295831/1‑150 (MQ=255)                                                                                                                ctcGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAg                                       <  2:415414/150‑1 (MQ=255)                                                                                                                    gCCGGGTTGCAAGCGCGTACCCGGAACGCGCGCATGTACATTTGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGa                                   <  1:695864/150‑1 (MQ=255)                                                                                                                      cGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAgc                                 <  2:63415/150‑1 (MQ=255)                                                                                                                              aaGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTg                         >  2:420869/1‑150 (MQ=255)                                                                                                                              aaGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTg                         >  1:528201/1‑150 (MQ=255)                                                                                                                                 cgcgTAGCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTc                      <  2:231166/150‑1 (MQ=255)                                                                                                                                      aCCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTCGCCAc                 >  1:452245/1‑150 (MQ=255)                                                                                                                                        ccGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTCGCCAccc               >  2:74656/1‑150 (MQ=255)                                                                                                                                                 gcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGc                                            <  1:722301‑M2/108‑1 (MQ=255)                                                                                                                                                 gcgcATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGc                                            >  2:722301‑M2/5‑112 (MQ=255)                                                                                                                                                     aTGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTCGCCACCCCAAACGGTACATg  >  2:794667/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                      CATGCCGCCGGGAGGTGGCGGTGGTCATGGTGGGGGTGGCCACGGCGGTGGTTTTGGTGGCCATCAGGGTGGCGGCCCGCGCTAAGCTGACCCCGCGATGGACCGCGCCCTCTCGGCCGGGTTGCAAGCGCGTACCCGGCACGGGCGCATGCACATTGGTCGCCCGAACCGCGCGTGGCACAGCGCCGGTGTTTGCGCCTTAGGGCATGCAGGATGATGCGCTGATCGGCAGTTGATCCTGCTTCACGTCGGGTGCCTGAGGCGAGCGCACTCTGTTCGCCACCCCAAACGGTACATG  >  NC_002947/2876223‑2876520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.