| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3712434 = | 38 (1.200) | 3 (0.100) | 3/236 | NT | 9.8% | coding (605/990 nt) | paaA | ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha |
| ? | NC_002947 | 3712486 = | 19 (0.630) | coding (553/990 nt) | paaA | ring 1,2‑phenylacetyl‑CoA epoxidase subunit alpha | |||||
TTTGATCTTCCAGGCCATCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGA > NC_002947/3712337‑3712590 | tttGATCTTCCAGGCCATCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAg > 2:616434/1‑150 (MQ=255)tttGATCTTCCAGGCCATCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGAGGAACAGCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAg > 1:320583/1‑150 (MQ=255) ggtactgcagcgcacctcttacggcccctactctcgcgcgatgaccctgatctgcaaggaagagagcttccaccagcgccagggctacgaaatgcTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCa > 1:93460‑M1/96‑150 (MQ=255) ttCCAGGCCATCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCg > 2:756658/1‑150 (MQ=255) aTCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTgg > 1:422437/1‑150 (MQ=255) cTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCtg < 1:756658/150‑1 (MQ=255) ggCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCtggtg < 1:562692/150‑1 (MQ=255) ggCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCtggtg < 1:460660/150‑1 (MQ=255) tGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGc > 2:332626/1‑150 (MQ=255) gCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCtt < 2:320583/150‑1 (MQ=255) cGAGGGTTCATCGCTCGGGCCGAACATCATGAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCTCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTc < 2:322024/150‑1 (MQ=255) gAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTcc < 1:599468/150‑1 (MQ=255) cGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGat < 2:422437/150‑1 (MQ=255) gAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATcgc > 1:785944/1‑150 (MQ=255) atcatcAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTAGCGCCTCTCTTCCTTGCAGATACGGATCATCGCGCgg < 1:839737/150‑1 (MQ=255) tcaGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGCGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGt > 2:349628/1‑150 (MQ=255) cgatctccacAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGcc < 1:398819/144‑1 (MQ=255) gCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCt < 1:562885/90‑1 (MQ=255) gCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCt > 2:562885/1‑90 (MQ=255) cacaGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTAGGCTCTCTTCGTGCATCTTGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAagag < 1:616434/150‑1 (MQ=255) tGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCa < 1:349628/150‑1 (MQ=255) gATGGCGTCCTGAACCATTTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAg > 2:229091/1‑150 (MQ=255) tgctcctgaccatgatgcgccagggcacccaagcccagcgcgacatggttcaggaGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATCAGGGTCATCGCGCGAGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTacc > 1:93460‑M2/56‑150 (MQ=255) CTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTg > 2:379189‑M1/1‑150 (MQ=255) atgatgcgccagggcacccaagcccagcgcgacatggttcaggaGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGa < 2:538431‑M2/105‑1 (MQ=255) atgatgcgccagggcacccaagcccagcgcgacatggttcaggaGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGa > 1:538431‑M2/45‑149 (MQ=255) | TTTGATCTTCCAGGCCATCGACTGGGCGCTGTTGGGCGAGTGTTCATCGCTCGGGCCGAACATCATCAGCGCCGGCCACCACAGGCGGTTGATGGCGTCCTGAACCATGTCGCGCTGGGCTTGGGTGCCCTGGCGCATCATGGTCAGGAGCATTTCGTAGCCCTGGCGCTGGTGGAAGCTCTCTTCCTTGCAGATACGGATCATCGCGCGGGAGTAGGGGCCGTAAGAGGTGCGCTGCAGTACCACCTGGTTGA > NC_002947/3712337‑3712590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |