New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4119119	29 (0.920)	4 (0.130)	4/242	NT	10.9%	coding (1765/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	= 4119138	37 (1.200)					coding (1784/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta

AACGACTTCTTCTACGAATCATTCCTGGACGAACTGGCGGACAAAGGTGGCAAGGACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCTGGCAA  >  NC_002947/4118999‑4119283                                                                                                                                            |                                                                                                                                                  aaggagttcttcTACGAATCATTCCTGGACGAACTGGCGGACAAAGTTGGCAAGGACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAgcgc                                                                                                                                         >  2:250304/7‑150 (MQ=255)    gACTTCTTCTACGAATCATTCCTGGACGAACTGGCGGACAAAGGTGGCAAGGACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGa                                                                                                                                      <  2:829263/150‑1 (MQ=255)                                          cAAAGGTGGCAAGGACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACgcgg                                                                                                >  1:661713/1‑150 (MQ=255)                                                      ggACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGc                                                                                    >  1:415040/1‑150 (MQ=255)                                                             tttGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACgcggc                                                                                               <  2:378959/132‑1 (MQ=255)                                                             tttGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACgcggc                                                                                               >  1:378959/1‑132 (MQ=255)                                                             tttGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACAGACCAACCTACAAAACGCAGGGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGCGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCg                                                                             >  2:247663/1‑150 (MQ=255)                                                                         cTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAg                                                                 >  1:284775/1‑150 (MQ=255)                                                                                tgctgcGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCa                                                                                <  1:366931/128‑1 (MQ=255)                                                                                tgctgcGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCa                                                                                >  2:366931/1‑128 (MQ=255)                                                                                     cgcgACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCAtt                                                     <  1:250304/150‑1 (MQ=255)                                                                                        gACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATg                                                                                      <  2:690593/114‑1 (MQ=255)                                                                                        gACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGcc                                                  >  1:616863/1‑150 (MQ=255)                                                                                        gACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGcc                                                  >  1:654199/1‑150 (MQ=255)                                                                                        gACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGACGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATg                                                                                      >  1:690593/1‑114 (MQ=255)                                                                                              ccGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAg                                                                 >  1:743457/1‑129 (MQ=255)                                                                                              ccGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAg                                                                 <  2:743457/129‑1 (MQ=255)                                                                                              ccGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGtt                                            >  2:332859/1‑150 (MQ=255)                                                                                                  gaCTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTtcga                                        <  1:119227/150‑1 (MQ=255)                                                                                                       accaccCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGAc                                   >  2:14860/1‑150 (MQ=255)                                                                                                       aCCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTg                                                                                            <  2:845888/93‑1 (MQ=255)                                                                                                       aCCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTg                                                                                            >  1:845888/1‑93 (MQ=255)                                                                                                              tgctgAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGcc                            >  1:810971/1‑150 (MQ=255)                                                                                                               gctgAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCa                           <  1:332859/150‑1 (MQ=255)                                                                                                                   aaCGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTc                       >  2:791809/1‑150 (MQ=255)                                                                                                                   aaCGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTc                       >  2:816389/1‑150 (MQ=255)                                                                                                                    aCGCAGTGGCCGACTTGTCCGGCGGctgcgttcagcaggttggtcagtctcgggttgtcgcgcagcaggtgcaggcgcagttcaaa                                                                                      <  2:549245‑M2/86‑62 (MQ=255)                                                                                                                    aCGCAGTGGCCGACTTGTCCGGCGGctgcgttcagcaggttggtcagtctcgggttgtcgcgcagcaggtgcaggcgcagttcaaa                                                                                      >  1:549245‑M2/1‑25 (MQ=255)                                                                                                                     cGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAg                     <  2:810971/150‑1 (MQ=255)                                                                                                                      gCAGTGGCCGACTTGTCCGGCGGctgcgttcagcaggttggtcagtctcgggttgtcgcgcagcaggtgcaggcgcagttcaaacgggtccttgc                                                                           <  2:737720‑M2/95‑73 (MQ=255)                                                                                                                      gCAGTGGCCGACTTGTCCGGCGGctgcgttcagcaggttggtcagtctcgggttgtcgcgcagcaggtgcaggcgcagttcaaacgggtccttgc                                                                           >  1:737720‑M2/1‑23 (MQ=255)                                                                                                                      gCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAgg                    <  2:284775/150‑1 (MQ=255)                                                                                                                          tGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGc                                                                       >  2:783652/1‑95 (MQ=255)                                                                                                                          tGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGc                                                                       <  1:783652/95‑1 (MQ=255)                                                                                                                            gCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCAc              <  1:816389/150‑1 (MQ=255)                                                                                                                            gCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTCCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGccc              >  2:275939/1‑148 (MQ=255)                                                                                                                                   tGTCCGGCGGCTGGAAGCGCGGACCGTTCACCACCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCt       <  2:657840/150‑1 (MQ=255)                                                                                                                                     tCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCg                                                           >  2:730483/1‑96 (MQ=255)                                                                                                                                     tCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCg                                                           <  1:730483/96‑1 (MQ=255)                                                                                                                                     tCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGCTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCTgg     >  2:532708/1‑150 (MQ=255)                                                                                                                                       cggcggCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCTGGCa   >  2:207562/1‑150 (MQ=255)                                                                                                                                        ggcggcTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCTGGCaa  <  2:654199/150‑1 (MQ=255)                                                                                                                                            |                                                                                                                                                  AACGACTTCTTCTACGAATCATTCCTGGACGAACTGGCGGACAAAGGTGGCAAGGACCCGTTTGAACTGCGCCTGCACCTGCTGCGCGACAACCCGAGACTGACCAACCTGCTGAACGCAGTGGCCGACTTGTCCGGCGGCTGGAAGCGCGGACCGTTCACCGCCGAGGACGGCAGCAAGCGCGCACGCGGCGTGGCCATGGCCTCACCGTTCGGCTCGGAGGCTGCGGTCATTGCCGAGGTTTCGATCGACAACGGCCAGGTCAGGGTGCACGACATCTGGCAA  >  NC_002947/4118999‑4119283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.