New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5696404	26 (0.820)	3 (0.100)	3/238	NT	9.7%	coding (1072/1272 nt)	pyrC'	dihydroorotase‑like protein
	?	NC_002947	= 5696426	31 (1.020)					coding (1094/1272 nt)	pyrC'	dihydroorotase‑like protein

CCGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACC  >  NC_002947/5696284‑5696571                                                                                                                                               |                                                                                                                                                  ccGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGCCCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGt                                                                                                                                            <  2:722480/150‑1 (MQ=255)          gcCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGaaa                                                                                                                                   <  1:30262/150‑1 (MQ=255)           ccACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCC‑GGCAGGCGCAGGGCGGCAGCCgggccgctgctcaggcgg                                                                                                                                 >  1:448759‑M2/1‑132 (MQ=255)             aCCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCATGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAgtg                                                                                                                                >  1:6393/1‑150 (MQ=255)             aCCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAgtg                                                                                                                                >  2:318523/1‑150 (MQ=255)                gAGCCGGGTATCAGCAGCGTCGCGTTGCTGCTGCCACTGGCCATGACCCTGGTGCACGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTAAGCAGGGTCCCGGCTTCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAgtgggt                                                                                                                             <  1:657398/150‑1 (MQ=255)                           cagcagCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCCGGGGTGCCGGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGa                                                                                                                  >  1:743480/1‑150 (MQ=255)                             gcagcGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGAcc                                                                                                                <  2:453546/150‑1 (MQ=255)                                              ctgcCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCg                                                                                               >  1:757894/1‑150 (MQ=255)                                                 ccACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCaa                                                                                            <  1:66563/150‑1 (MQ=255)                                                         cATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGCCCTAGCTGGCCCGCCTGAGCCGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGCCCTGGTGCTGTTCGACCCGCCAGCGTcctg                                                                                    >  2:308613/1‑148 (MQ=255)                                                         cATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCAc                                                                                    >  2:462575/1‑150 (MQ=255)                                                             aCCCTGGTGCATGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGtt                                                                                <  2:6393/150‑1 (MQ=255)                                                              cccTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTg                                                                               >  2:752272/1‑150 (MQ=255)                                                              cccTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTg                                                                               >  2:536538/1‑150 (MQ=255)                                                                   gTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGa                                                                                                                                     <  1:595967/91‑1 (MQ=255)                                                                   gTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGa                                                                                                                                     >  2:595967/1‑91 (MQ=255)                                                                           cGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATg                                                                  <  1:318523/150‑1 (MQ=255)                                                                              ccTTCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGtt                                                               >  1:248104/1‑150 (MQ=255)                                                                                     gACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTtctcgcca                                                        >  1:404218/1‑146 (MQ=255)                                                                                      aCCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTcc                                                           <  1:447595/146‑1 (MQ=255)                                                                                      aCCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTcc                                                           >  2:447595/1‑146 (MQ=255)                                                                                        cTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCAGTGAg                                                                                                                                         <  1:660643/66‑1 (MQ=255)                                                                                        cTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCAGTGAg                                                                                                                                         >  2:660643/1‑66 (MQ=255)                                                                                             gACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCAACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGaa                                                >  1:503413/1‑150 (MQ=255)                                                                                                       gCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTc                                      >  1:434702/1‑150 (MQ=255)                                                                                                                       gCCCGGCTGCCGCCCTGCGCCTGCCggccgctgctcaggcgggccagcaaggtcggcaggtcgagcaggccgt                                                                                                   <  1:155453‑M2/73‑49 (MQ=255)                                                                                                                       gCCCGGCTGCCGCCCTGCGCCTGCCggccgctgctcaggcgggccagcaaggtcggcaggtcgagcaggccgt                                                                                                   >  2:155453‑M2/1‑25 (MQ=255)                                                                                                                           ggCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCggg                  >  2:348034/1‑150 (MQ=255)                                                                                                                              tGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGATGCTGTTCGACCCGCCCGGGGCCACCGGTGCGGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGgcgc               >  1:530812/1‑150 (MQ=255)                                                                                                                                    ccTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCg         >  2:297405/1‑150 (MQ=255)                                                                                                                                    ccTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCg         <  1:462575/150‑1 (MQ=255)                                                                                                                                     cTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGt        <  1:312457/150‑1 (MQ=255)                                                                                                                                     cTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGt        >  1:505718/1‑150 (MQ=255)                                                                                                                                         gcCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGtt                                                               >  2:446445/1‑91 (MQ=255)                                                                                                                                         gcCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGtt                                                               <  1:446445/91‑1 (MQ=255)                                                                                                                                         gcCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTtata    <  1:297405/150‑1 (MQ=255)                                                                                                                                           cTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGGCCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATAcc  >  1:690913/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                                  CCGTTCGGCGCCACCGAGCCGGGTATCAGCAGCGTCGAGTTGCTGCTGCCACTGGCCATGACCCTGGTGCAGGACGGCCTGCTCGACCTGCCGACCTTGCTGGCCCGCCTGAGCAGCGGCCCGGCTGCCGCCCTGCGCCTGCCGGCCGGTGAGCTGAAAGTGGGTGGCGCGGCCGACCTGGTGCTGTTCGACCCGCAAGCGTCCACCGTTGCTGGCGAACAATGGTTCTCCCGTGGCGAGAACTGCCCGTTCATCGGCCACTGCCTGCCGGGCGCGGTGCGTTATACC  >  NC_002947/5696284‑5696571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.