| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 413997 = | 15 (1.150) | 7 (0.670) | 6/218 | 0.6 | 50.1% | intergenic (+14/‑189) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
| ? | NC_002947 | 414083 = | 2 (0.190) | intergenic (+100/‑103) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II | |||||
TGCGGTACAGCCTGGCCTCCCCTCTTTATATTCAGGCTATGTGGCGGACAGTGTACCACTCACATGGCCTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414151‑413997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGG > NC_002947/414083‑414228 ttCGGTACAGCCTGGCCTCCCCTCTTTATATTCAGGCTATGTGGCGGACAGTGTACCACTCACATGGCCTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGC < 1:225492/144‑1ttCGGTACAGCCTGGCCTCCCCTCTTTATATTCAGGCTATGTGGCGGACAGTGTACCACTCACATGGCCTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGC > 2:225492/3‑146 TCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATGGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCC > 2:253520/1‑150 CACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGA > 1:110079/1‑150 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAG > 1:256817/1‑140 ACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAG < 2:256817/140‑1 AGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCG > 2:206586/1‑150 AGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAA < 1:139170/100‑1 AGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAA > 2:139170/1‑100 CCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTG > 1:219188/1‑150 ctattcGCGGGCAAGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCAGACACAGGGGCAGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCC > 2:77054/7‑150 GCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCT < 2:219188/150‑1 CCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGC > 1:154184/1‑148 CCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGC < 2:154184/148‑1 CGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAC > 1:45491/1‑150 AATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGG < 1:14781/150‑1 TGCGGTACAGCCTGGCCTCCCCTCTTTATATTCAGGCTATGTGGCGGACAGTGTACCACTCACATGGCCTATTCGCGGGCAAGCCCGCTCCCACAGGGATTGCACACTGCTCAGGGCCTGTGCAGTACCTGTGGGAGCGGGCTTGCCCGCGAATA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/414151‑413997‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGG > NC_002947/414083‑414228 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |