New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 413997 = | 15 (1.150) | 7 (0.670) | 6/218 | 0.6 | 50.1% | intergenic (+14/‑189) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
? | NC_002947 | 414083 = | 2 (0.190) | intergenic (+100/‑103) | glnE/waaF | glutamate‑ammonia‑ligase adenylyltransferase/ADP‑heptose:LPS heptosyltransferase II |
GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGG > NC_002947/414006‑414228 | GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTAccgaa > 2:225492‑M1/1‑144 (MQ=255) GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTAccgaa < 1:225492‑M1/146‑3 (MQ=255) tcccacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATGGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTccc > 2:253520‑M2/68‑150 (MQ=255) cacagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGa > 1:110079‑M2/65‑150 (MQ=255) acagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAg < 2:256817‑M2/77‑1 (MQ=255) acagggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAg > 1:256817‑M2/64‑140 (MQ=255) agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGaa < 1:139170‑M2/39‑1 (MQ=255) agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGaa > 2:139170‑M2/62‑100 (MQ=255) agggattgcacactgctcagggcctgtgcagtacctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCg > 2:206586‑M2/62‑150 (MQ=255) acaCTGCTCAGGGCCTGTGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGtt > 2:14781/3‑150 (MQ=255) tgtgCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTATCTGGACTAAACAAGCGAATAc > 1:221971/1‑150 (MQ=255) cctgtgggagcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTg > 1:219188‑M2/29‑150 (MQ=255) ctattcgcgggcaagcccgcgaataGGCCATGTGAGTGGTACACTGTCAGACACAGGGGCAGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGcc > 2:77054‑M2/26‑150 (MQ=255) gcgggcttgcccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCt < 2:219188‑M2/131‑1 (MQ=255) ccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGc < 2:154184‑M2/139‑1 (MQ=255) ccgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGc > 1:154184‑M2/10‑148 (MQ=255) cgcgaataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGAc > 1:45491‑M2/9‑150 (MQ=255) aataGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATgg < 1:14781‑M2/146‑1 (MQ=255) | GCAAGCCCGCTCCCACAGGTACTGCACAGGCCCTGAGCAGTGTGCAATCCCTGTGGGAGCGGGCTTGCCCGCGAATAGGCCATGTGAGTGGTACACTGTCCGCCACATAGCCTGAATATAAAGAGGGGAGGCCAGGCTGTACCGCAGCCTGTAGCCTCCCCGAGCGTTTCTGGACTAAGCATGAGAATACTGATCATTGGCCCCAGCTGGGTCGGCGACATGG > NC_002947/414006‑414228 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |