| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 914680 | 15 (1.150) | 4 (0.310) | 4/268 | 1.1 | 21.8% | coding (1388/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
| ? | NC_002947 | = 914721 | 14 (1.100) | coding (1429/1743 nt) | fruA | PTS fructose transporter subunit IIBC | |||||
CATGATGTGCGTCGACCTTGGCGGGCCGATCAACAAGGCCGCCTATGCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCG > NC_002947/914531‑914804 | cttgatgtgCGTCTTCCTTGGTGGGCGGATCAACAAGGCCGCCTATGCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCT < 2:32848‑M1/148‑1 (MQ=255) tgatgTGCGTCGACCTTGGCGGGCCGATCAACAAGGCCGCCTATGCGTTCTCGGTGGGGATGCTGGCATCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTgg > 2:106168/1‑150 (MQ=255) gATCAACAAGGCCGCCTATGCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTTGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAgagcga > 1:283591/1‑150 (MQ=255) ccgccTATGCGTTCTCGGTGGGGCTGCTGGCATCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCgg > 2:268626/1‑150 (MQ=255) gCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAggcg < 2:244049/150‑1 (MQ=255) cTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCggg < 2:189506/120‑1 (MQ=255) cTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCggg > 1:189506/1‑120 (MQ=255) cTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCg > 1:170338/1‑118 (MQ=255) cTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCg < 2:170338/118‑1 (MQ=255) tcgAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtc < 1:77384/150‑1 (MQ=255) tcgAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtc < 1:77430/150‑1 (MQ=255) gAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtctc > 1:112470/1‑150 (MQ=255) gCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTtgcccgcctcgcgctcgctctgggcgaacttgcgccgggcca < 2:150231‑M1/115‑43 (MQ=255) gCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTtgcccgcctcgcgctcgctctgggcgaacttgcgccgggcca > 1:150231‑M1/1‑73 (MQ=255) ggcgACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTtgcccgcctcgcgctcgctctgggcgaacttgcgccgggccaggaaggt > 1:250024‑M1/1‑57 (MQ=255) ggcgACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTtgcccgcctcgcgctcgctctgggcgaacttgcgccgggccaggaaggt < 2:250024‑M1/106‑50 (MQ=255) ggCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGcgctggcgctgg < 2:45400/107‑1 (MQ=255) ggCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGcgctggcgctgg > 1:45400/1‑107 (MQ=255) cggccATGGTCGCCGCC‑ATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGAcc < 2:292087/146‑1 (MQ=255) aTTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCg > 2:145068/1‑150 (MQ=255) aCCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgcc < 2:250024‑M2/106‑58 (MQ=255) aCCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgcc > 1:250024‑M2/1‑49 (MQ=255) tGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgccgccattggcgcgtagc < 2:150231‑M2/115‑74 (MQ=255) tGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgccgccattggcgcgtagc > 1:150231‑M2/1‑42 (MQ=255) | CATGATGTGCGTCGACCTTGGCGGGCCGATCAACAAGGCCGCCTATGCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCG > NC_002947/914531‑914804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |