New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 914680 | 15 (1.150) | 4 (0.310) | 4/268 | 1.1 | 21.8% | coding (1388/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
? | NC_002947 | = 914721 | 14 (1.100) | coding (1429/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
GCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCGGCCAGTATCGCCGGTGGTGCGTTGACCGGGGCATTGTCGATGTATTTTGGCTGCAAGCTGATG > NC_002947/914577‑914867 | gCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAggcg < 2:244049/150‑1 (MQ=255) tcgAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtc < 1:77384/150‑1 (MQ=255) tcgAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtc < 1:77430/150‑1 (MQ=255) gAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCAtctc > 1:112470/1‑150 (MQ=255) ggCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGcgctggcgctgg < 2:45400/107‑1 (MQ=255) ggCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGcgctggcgctgg > 1:45400/1‑107 (MQ=255) cggccATGGTCGCCGCC‑ATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGAcc < 2:292087/146‑1 (MQ=255) aTTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCg > 2:145068/1‑150 (MQ=255) aCCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgcc > 1:250024‑M2/1‑49 (MQ=255) aCCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgcc < 2:250024‑M2/106‑58 (MQ=255) tGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgccgccattggcgcgtagc > 1:150231‑M2/1‑42 (MQ=255) tGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAaggaaggtggcaatacccaagccaatcggcggcaccatgccggcggccatggtcgccgccattggcgcgtagc < 2:150231‑M2/115‑74 (MQ=255) gCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCggcgc < 2:29933/49‑1 (MQ=255) gCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCggcgc > 1:29933/1‑49 (MQ=255) tggCGCAACTTCGCCCAGAGCGAGCGCGAGGCCGGCAAGGCGGCGCTGGCGCTGCCGCGGCGCTATCCCTTTTTTGGGGTGATTCCGTTTGCCGCCAAGGACTGGTTACGGGTGATCCCGGCCAGTATCGCCGGTGGTGCGTTGACCggg < 2:104566/149‑1 (MQ=255) ccAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAgggg > 2:275090/1‑64 (MQ=255) ccAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAgggg < 1:275090/64‑1 (MQ=255) ggCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCGGCCAGTATCGCCGGTGGTGCGTTGACCGGGGCATTGTCGATGTATTTTGGCTGCAAGCTGATg < 1:145068/150‑1 (MQ=255) | GCGTTCTCGGTGGGGCTGCTGGCCTCGTCGAGCTACGCGCCAATGGCGGCGACCATGGCCGCCGGCATGGT‑GCCGCCGATTGGCTTGGGTATTGCCACCTTCCTGGCCCGGCGCAAGTTCGCCCAGAGCGAGCGCGAGGCGGGCAAGGCGGCGCTGGCGCTGGGGCTGTGCTTCATCTCCGAGGGGGCGATTCCGTTTGCCGCCAAGGACCCGTTACGGGTGATCCCGGCCAGTATCGCCGGTGGTGCGTTGACCGGGGCATTGTCGATGTATTTTGGCTGCAAGCTGATG > NC_002947/914577‑914867 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |