New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 61430043 (0.980)9 (0.270) 9/202 2.6 18.2% intergenic (‑116/+62) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
?NC_002947 = 614316 48 (1.440)intergenic (‑132/+46) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
Rejected: Frequency below/above cutoff threshold.

AGCGCGGTCGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/614122‑614300
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtaggatcgggtttacccgcgaatgcgATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCAC  <  NC_002947/614316‑614177
                                                                                                                                                                                                                                                                                                                               
AGCGCGGTCGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCC                                                                                                                                                                           <  2:412980/150‑1
        CGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGA                                                                                                                                                                   <  1:778789/150‑1
            CAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGG                                                                                                                                                               <  1:676629/150‑1
              ACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGT                                                                                                                                                             >  2:115733/1‑150
                          GGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAAT                                                                                                                                                 <  2:1047293/150‑1
                          GGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAAT                                                                                                                                                 <  2:588328/150‑1
                                  CGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTT                                                                                                                                         <  2:17978/150‑1
                                             TTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATC                                                                                                                                                                 >  2:450060/1‑115
                                             TTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATC                                                                                                                                                                 <  1:450060/115‑1
                                                        gGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGG                                                                                                                   <  2:624154/149‑1
                                                                 GGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTGCCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCG                                                                                                          <  2:979764/150‑1
                                                                                     TGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCG                                                                                                                    <  1:722885/120‑1
                                                                                     TGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCG                                                                                                                    >  2:722885/1‑120
                                                                                                          CATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGAC                                                                                                                             >  1:715604/1‑90
                                                                                                          CATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGAC                                                                                                                             <  2:715604/90‑1
                                                                                                                 GGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGT                                                                                                                                                                       >  1:179517/1‑41
                                                                                                                 GGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGT                                                                                                                                                                       <  2:179517/41‑1
                                                                                                                             ATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGG                                                                                                                  >  1:778743/1‑82
                                                                                                                             ATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGG                                                                                                                  <  2:778743/82‑1
                                                                                                                                                     CCTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACACATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATA                      >  1:814775/1‑150
                                                                                                                                                      CTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAA                     <  2:274978/150‑1
                                                                                                                                                      CTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAA                     >  1:115733/1‑150
                                                                                                                                                      CTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTG                                                                                 <  2:1019672/90‑1
                                                                                                                                                      CTGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTG                                                                                 >  1:1019672/1‑90
                                                                                                                                                       TGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAAC                    <  2:70168/150‑1
                                                                                                                                                       TGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGC                                       >  1:735985/1‑131
                                                                                                                                                       TGTAGGATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGC                                       <  2:735985/131‑1
                                                                                                                                                            tATCGGGTTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTC               <  1:524090/149‑1
                                                                                                                                                                   TTTACCCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGAT        <  1:905938/150‑1
                                                                                                                                                                        CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAA                     >  2:144970/1‑132
                                                                                                                                                                        CCGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAA                     <  1:144970/132‑1
                                                                                                                                                                         CGCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCAC  <  1:332334/150‑1
                                                                                                                                                                         CGCGAATGCGATCTTGAATGTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCAC  <  1:879523/150‑1
                                                                                                                                                                          GCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCTCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGC                                       >  2:232308/1‑112
                                                                                                                                                                          GCGAATGCGATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCTCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGC                                       <  1:232308/112‑1
                                                                                                                                                                                                                                                                                                                               
AGCGCGGTCGAGCAACGGCGTGACCGGGCGTTCGCGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/614122‑614300
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctgtaggatcgggtttacccgcgaatgcgATCTTGAATTTGCCGACGCATTCGCGGGTAAACCCGATCCTACAGGGGGCCGCGTAACCTGTGGTCGAATGGGCACTTTTCCCACAATGGGGTAAACTGCCGCGTCTTCACACACCTATAACGACTCGCCTGATGCCCAC  <  NC_002947/614316‑614177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.