New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 61430043 (0.980)9 (0.270) 9/202 2.6 18.2% intergenic (‑116/+62) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
?NC_002947 = 614316 48 (1.440)intergenic (‑132/+46) dxs/ispA 1‑deoxyxylulose‑5‑phosphate synthase/farnesyl diphosphate synthase
Rejected: Frequency below/above cutoff threshold.

CGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTG  >  NC_002947/614156‑614448
                                                                                                                                                |                                                                                                                                                    
cgGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatctt                                                                                                                                                 <  2:17978‑M1/150‑6 (MQ=255)
    ggATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAAt                                                                                                                                             >  2:804927/1‑150 (MQ=255)
          ctTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGa                                                                                                                                       <  2:5475/150‑1 (MQ=255)
                     gtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCACATTCAAGATcgcattcgcg                                                                                                                            <  1:879523‑M2/150‑11 (MQ=255)
                     gtGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcg                                                                                                                            <  1:332334‑M2/150‑11 (MQ=255)
                      ggggcATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgg                                                                                                                           <  2:624154‑M1/149‑28 (MQ=255)
                           aTCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaa                                                                                                                      <  1:905938‑M2/150‑17 (MQ=255)
                               ggCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTGCCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccg                                                                                                                  <  2:979764‑M1/150‑37 (MQ=255)
                                  gAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgata                                                                                                               <  1:524090‑M2/150‑24 (MQ=255)
                                       gTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctaca                                                                                                          <  2:70168‑M2/150‑29 (MQ=255)
                                        ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                         >  1:115733‑M2/1‑121 (MQ=255)
                                        ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                         <  2:274978‑M2/150‑30 (MQ=255)
                                        ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgg                                                                                                                           <  1:144970‑M2/132‑12 (MQ=255)
                                        ttATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgg                                                                                                                           >  2:144970‑M2/1‑121 (MQ=255)
                                         tataGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGTGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagg                                                                                                        >  1:814775‑M2/1‑120 (MQ=255)
                                                gtgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGt                                                                                                 <  1:70168/150‑1 (MQ=255)
                                                 tgtgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTg                                                                                                >  1:225830/1‑150 (MQ=255)
                                                   tgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcg                                                                                                                            <  1:722885‑M1/120‑27 (MQ=255)
                                                   tgAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcg                                                                                                                            >  2:722885‑M1/1‑94 (MQ=255)
                                                          gcgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctaca                                                                                                          <  2:735985‑M2/131‑29 (MQ=255)
                                                          gcgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctaca                                                                                                          >  1:735985‑M2/1‑103 (MQ=255)
                                                          gcgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGAGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgc                                                                                                                             <  1:232308‑M2/112‑10 (MQ=255)
                                                          gcgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGAGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgc                                                                                                                             >  2:232308‑M2/1‑103 (MQ=255)
                                                           cgGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTa                                                                                      <  1:804927/150‑1 (MQ=255)
                                                            ggCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAg                                                                                     >  1:36653/1‑150 (MQ=255)
                                                             gCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                                                   <  1:502760/87‑1 (MQ=255)
                                                             gCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCg                                                                                                                                                   >  2:502760/1‑87 (MQ=255)
                                                                      cccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAg                                                                                                   >  1:980685/1‑126 (MQ=255)
                                                                      cccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAg                                                                                                   <  2:980685/126‑1 (MQ=255)
                                                                      cccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGtt                                                                           >  1:1036846/1‑150 (MQ=255)
                                                                       ccATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTc                                                                          >  1:460235/1‑150 (MQ=255)
                                                                        cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgac                                                                                                                                     >  1:715604‑M1/1‑73 (MQ=255)
                                                                        cATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgac                                                                                                                                     <  2:715604‑M1/90‑18 (MQ=255)
                                                                          ttGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTa                                                                                      >  1:59251/1‑135 (MQ=255)
                                                                          ttGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTa                                                                                      <  2:59251/135‑1 (MQ=255)
                                                                          ttGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGAc                                                                       <  2:225830/150‑1 (MQ=255)
                                                                             tgGGAAAAGTGCCCATTCGACCACCAGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAat                                                                    >  1:855771/1‑150 (MQ=255)
                                                                               ggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGa                                                                                                      >  1:698639/1‑114 (MQ=255)
                                                                               ggAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGa                                                                                                      <  2:698639/114‑1 (MQ=255)
                                                                                gAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAGGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGc                                                                                            <  2:60369/123‑1 (MQ=255)
                                                                                gAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAGGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGc                                                                                            >  1:60369/1‑123 (MQ=255)
                                                                                      tGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACgcgc                                                           >  2:492072/1‑150 (MQ=255)
                                                                                      tGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACgcgc                                                           >  2:64411/1‑150 (MQ=255)
                                                                                      tGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTNTACNCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATCGGTGAAGCTGTCTAGTTACGGCGTTCGACAATATAACgcgc                                                           >  1:1003616/1‑150 (MQ=255)
                                                                                           aTTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcggg                                                                                                                          <  2:778743‑M1/82‑29 (MQ=255)
                                                                                           aTTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcggg                                                                                                                          >  1:778743‑M1/1‑54 (MQ=255)
                                                                                                  cacaGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGa                                                                                                      >  1:694888/1‑95 (MQ=255)
                                                                                                  cacaGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGa                                                                                                      <  2:694888/95‑1 (MQ=255)
                                                                                                   acaGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGc                                              >  1:1049282/1‑150 (MQ=255)
                                                                                                    caGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                         <  2:1019672‑M2/90‑30 (MQ=255)
                                                                                                    caGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacag                                                                                                         >  1:1019672‑M2/1‑61 (MQ=255)
                                                                                                         tACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCg                                        <  2:36653/150‑1 (MQ=255)
                                                                                                          aCGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCgg                                       >  1:845336/1‑150 (MQ=255)
                                                                                                                cccccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAata                                                                   <  1:527012/116‑1 (MQ=255)
                                                                                                                cccccTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAata                                                                   >  2:527012/1‑116 (MQ=255)
                                                                                                                   ccTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacacattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctata                              >  1:814775‑M1/1‑30 (MQ=255)
                                                                                                                    cTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataa                             >  1:115733‑M1/1‑29 (MQ=255)
                                                                                                                    cTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataa                             <  2:274978‑M1/150‑122 (MQ=255)
                                                                                                                    cTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctg                                                                                         >  1:1019672‑M1/1‑29 (MQ=255)
                                                                                                                    cTGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctg                                                                                         <  2:1019672‑M1/90‑62 (MQ=255)
                                                                                                                    cTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGcc                             >  1:1034694/1‑150 (MQ=255)
                                                                                                                     tGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataac                            <  2:70168‑M1/150‑123 (MQ=255)
                                                                                                                     tGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgc                                               >  1:735985‑M1/1‑28 (MQ=255)
                                                                                                                     tGTAGGATCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgc                                               <  2:735985‑M1/131‑104 (MQ=255)
                                                                                                                        aGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAAc                         <  2:1049282/150‑1 (MQ=255)
                                                                                                                         ggATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAAcc                        >  2:577438/1‑150 (MQ=255)
                                                                                                                          tatCGGGTTTACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactc                       <  1:524090‑M1/149‑128 (MQ=255)
                                                                                                                            tCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGGGTTCGACAATATAACGCGCCGAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCtt                     >  1:64212/1‑150 (MQ=255)
                                                                                                                            tCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCtt                     >  2:762062/1‑150 (MQ=255)
                                                                                                                             cGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggcaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcc                    <  2:979764‑M2/150‑115 (MQ=255)
                                                                                                                             cGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTg                    <  2:460235/150‑1 (MQ=255)
                                                                                                                                 tttACCCGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgat                <  1:905938‑M1/150‑135 (MQ=255)
                                                                                                                                    aCCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCg             <  1:274978/150‑1 (MQ=255)
                                                                                                                                     cccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaat                                                                                <  2:778743‑M2/82‑55 (MQ=255)
                                                                                                                                     cccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaat                                                                                >  1:778743‑M2/1‑28 (MQ=255)
                                                                                                                                      ccGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataa                             <  1:144970‑M1/132‑122 (MQ=255)
                                                                                                                                      ccGCGAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataa                             >  2:144970‑M1/1‑11 (MQ=255)
                                                                                                                                      ccGCGAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgcccc           <  2:624154‑M2/150‑124 (MQ=255)
                                                                                                                                      ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAg                                                                                             <  1:551861/68‑1 (MQ=255)
                                                                                                                                      ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAg                                                                                             >  2:551861/1‑68 (MQ=255)
                                                                                                                                      ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGc           >  1:373797/1‑150 (MQ=255)
                                                                                                                                      ccGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGc           <  2:905938/150‑1 (MQ=255)
                                                                                                                                       cgcgAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgcccac          <  1:332334‑M1/150‑141 (MQ=255)
                                                                                                                                       cgcgAATGCGatcttgaatgtgccgacgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttcacacacctataacgactcgcctgatgcccac          <  1:879523‑M1/150‑141 (MQ=255)
                                                                                                                                       cgcgAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttca                                        >  2:722885‑M2/1‑26 (MQ=255)
                                                                                                                                       cgcgAATGCGTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgcgtcttca                                        <  1:722885‑M2/120‑95 (MQ=255)
                                                                                                                                        gcgAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggcctcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgc                                               <  1:232308‑M1/112‑104 (MQ=255)
                                                                                                                                        gcgAATGCGatcttgaatttgccgacgcattcgcgggtaaacccgatcctacagggggcctcgtaacctgtggtcgaatgggcacttttcccacaatggggtaaactgccgc                                               >  2:232308‑M1/1‑9 (MQ=255)
                                                                                                                                              gCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCt   <  2:1036846/150‑1 (MQ=255)
                                                                                                                                               cGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGACGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTg  >  1:181776/1‑150 (MQ=255)
                                                                                                                                                gTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatg                                                             <  2:715604‑M2/90‑74 (MQ=255)
                                                                                                                                                gTCGGCAAATTCAAGATcgcattcgcgggtaaacccgatcctacagggggccgcgtaacctgtggtcgaatgggcacttttcccacaatg                                                             >  1:715604‑M2/1‑17 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
CGGGGGATCTCTTGAAACGTCGTGGGCATCAGGCGAGTCGTTATAGGTGTGTGAAGACGCGGCAGTTTACCCCATTGTGGGAAAAGTGCCCATTCGACCACAGGTTACGCGGCCCCCTGTAGGATCGGGTTTACCCGCGAATGCGTCGGCAAATTCAAGATCGCATTCGCGGGTAAACCCGATCCTACAGGGATAGGTGAAGCTGTTTAGTTACGGCGTTCGACAATATAACGCGCCAAGGCCCGCAGCGGCTCGGCCTTTTCGCCGAACCCTTGCAGTGCGGCCAGCGCCTG  >  NC_002947/614156‑614448

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.