| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5307722 = | NA (NA) | 28 (0.680) | 18/248 | 1.5 | 76.8% | intergenic (‑118/+14) | PP_5SG/PP_23SG | 5S ribosomal RNA/23S ribosomal RNA |
| ? | NC_002947 | 5307725 = | 9 (0.210) | intergenic (‑121/+11) | PP_5SG/PP_23SG | 5S ribosomal RNA/23S ribosomal RNA | |||||
TCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTC > NC_002947/5307580‑5307869 | tCCAATTCTCTATGGTCGTAAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGa < 1:955264/150‑1 (MQ=17) tctcactgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgagtgtttaccatataacacccaagcaatctgctacGCAGAt < 2:39151‑M2/6‑1 (MQ=255) ctcactgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgctacGCAGAtt < 2:12415‑M2/7‑1 (MQ=255) tcactgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgctacGCAGATTg > 1:395548‑M2/143‑150 (MQ=255) tcactgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTg < 2:722368‑M2/8‑1 (MQ=255) gCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCtt < 1:992530/150‑1 (MQ=32) actgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgttaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCt < 1:843183‑M2/10‑1 (MQ=255) ctgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCtt < 2:420616‑M2/11‑1 (MQ=255) ctgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCtt < 2:390835‑M2/11‑1 (MQ=255) tgggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTg < 2:374724‑M2/12‑1 (MQ=255) gggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaaacaatctgcgtaGCAGATTGCTTgg < 2:547102‑M2/13‑1 (MQ=255) gggatcttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacaccaccgcaatctgcgtaGCAGATTGCTTgg < 2:152962‑M2/13‑1 (MQ=255) tATGGTCGTGAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGgt < 2:1019016/150‑1 (MQ=17) tGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGgtgt < 2:559257/150‑1 (MQ=32) ttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTg > 2:334398‑M2/132‑143 (MQ=255) ttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTg < 1:334398‑M2/12‑1 (MQ=255) ttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacaccaccacaatctgcgtaGCAGATTGCTTgg < 2:107382‑M2/13‑1 (MQ=255) ttgaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacaccaccacaatctgcgtaGCAGATTGCTTgg > 1:107382‑M2/132‑144 (MQ=255) gaatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaaacaatctgcgtaGCAGATTGCTTGGGTGTtata < 1:454627‑M2/21‑1 (MQ=255) aatcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacaccaccacaatctgcgtaGCAGATTGCTTGGGTGTTatat < 2:717980‑M2/22‑1 (MQ=255) atcccctaaagggccgtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTGGGTGTTATATg < 2:1027515‑M2/23‑1 (MQ=255) aaGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGGTGTTATATGGt > 1:929714/1‑150 (MQ=32) aTTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGGTGTTATATGGTCAAGc < 1:233729/150‑1 (MQ=32) gtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTGGGTGTTATATGGTCAAGc > 2:459888‑M2/113‑142 (MQ=255) gtcgaagactacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTGGGTGTTATATGGTCAAGc < 1:459888‑M2/30‑1 (MQ=255) ggAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCaa > 1:524847/1‑150 (MQ=11) tacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaaacaatctgcgtaGCAGATTGCTTg > 1:872487‑M2/104‑115 (MQ=255) tacgacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaaacaatctgcgtaGCAGATTGCTTg < 2:872487‑M2/12‑1 (MQ=255) gacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCt > 1:781523‑M2/101‑110 (MQ=255) gacgttgataggttgggtgtgtaagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCt < 2:781523‑M2/10‑1 (MQ=255) ccAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGC‑TACGCAGATTgtg < 1:946862/99‑3 (MQ=1) ccAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGC‑TACGCAGATTgtg > 2:946862/1‑97 (MQ=1) taagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg < 1:98200‑M2/13‑1 (MQ=255) taagcgctgtgaggcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg > 2:98200‑M2/80‑92 (MQ=255) gcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg > 2:311025‑M2/67‑79 (MQ=255) gcgttgagctaaccaatactaattgcccgtgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg < 1:311025‑M2/13‑1 (MQ=255) tgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg > 2:921007‑M2/38‑50 (MQ=255) tgaggcttgaccatataacacccaagcaatctgcgtaGCAGATTGCTTgg < 1:921007‑M2/13‑1 (MQ=255) aagcaatcggctacGCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAg > 2:43071‑M2/15‑150 (MQ=255) atctgctacGCAGATTGTTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTgaga < 1:547102‑M2/141‑1 (MQ=255) gctacGCAGATTGTGGTGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGAtctc < 1:717980‑M2/145‑1 (MQ=255) | TCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCGGAATGTCCAGATGGACAGCCCAGCGAATTCGGATATGCGATATTTGCGAAGCTCTTGTGTAAAGCACGAATTTTCGGGTCTTTCGTCTTCACCACCACAATCTGCGTA‑GCAGATTGCTTGGGTGTTATATGGTCAAGCCTCACGGGCAATTAGTATTGGTTAGCTCAACGCCTCACAGCGCTTACACACCCAACCTATCAACGTCGTAGTCTTCGACGGCCCTTTAGGGGATTCAAGATCCCAGTGAGATCTC > NC_002947/5307580‑5307869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |