New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	86750 =	31 (1.170)	8 (0.340)	6/242	2.1	22.4%	intergenic (‑33/+112)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein
	?	NC_002947	86841 =	28 (1.200)					intergenic (‑124/+21)	PP_0075/PP_0076	choline sulfate transporter/choline betaine‑binding protein

ACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/86912‑86750 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCT  >  NC_002947/86841‑86984                                                                                                                                                                                                                                                                                                                     ACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCC                                                                                                                                                               >  2:243467/1‑150       AAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCC                                                                                                                                                         >  1:204067/1‑150                                                                               GGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGCTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCT                                                                                 >  1:602688/1‑150                                                                                             CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATC                                                                                            <  1:276651/125‑1                                                                                             CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATC                                                                                            >  2:276651/1‑125                                                                                             CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTAACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCG                                                                   >  1:137535/1‑150                                                                                             CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTT                                                                                                              >  1:598114/1‑107                                                                                             CCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTT                                                                                                              <  2:598114/107‑1                                                                                              CGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGG                                                                  >  1:490803/1‑150                                                                                                                                                GCATGCCCGCTCCCACAGGGCTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCC                <  2:602688/150‑1                                                                                                                                                    GCCCGCTCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTT            >  2:625613/1‑150                                                                                                                                                          TCCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGA      <  1:625613/150‑1                                                                                                                                                           CCCACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACTGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAA     <  2:465474/150‑1                                                                                                                                                             CACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCATTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGC   >  1:386731/1‑150                                                                                                                                                              ACAGGGTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCT  >  1:230615/1‑150                                                                                                                                                                                                                                                                                                                     ACCACCAAGGCCGATGGGGATGCCCTGGAGGCCGTCAAAGCCAAACTGTAATCTCACAAAGCAACACACCAACCCTGTGGGAGCGGGCGCGCCCGCGAACACCGGCAAAGCCGGTGCCAAGCAACGCGTTGGCTTTTTCGCGGGCATGCCCGCTCCCACAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/86912‑86750 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccgctcccacagggTTGGTGTGTTGCTTTGTGAGATTACAGTTTGGCTTTGACGGCCTCCAGGGCATCCCCATCGGCCTTGGTGGTAACTCCGGCCAACCACCCATCCAACCGTTCAGGATGCGCTTTCACCCAGGCCTTGGCCGCTTCATCGAAGCT  >  NC_002947/86841‑86984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.