New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	277165 =	142 (1.600)	9 (0.120)	9/216	NT	7.6%	coding (3/1221 nt)	PP_0223	DszC family monooxygenase
	?	NC_002947	277234 =	94 (1.210)					intergenic (‑67/+30)	PP_0223/PP_0224	DszC family monooxygenase/DszC family monooxygenase

ACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/277325‑277165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGG  >  NC_002947/277234‑277378                                                                                                                                                                                                                                                                                                                    ACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTCCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTT                                                                                                                                                              >  1:1948889/1‑150   CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT                                                                                                                                                            >  2:462573/1‑150   CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT                                                                                                                                                            >  2:1150022/1‑150   CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGT                                                                                                                                                            <  2:2137510/150‑1   CACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGT                                                                                                                                                            >  1:384912/1‑150    ACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTG                                                                                                                                                           >  1:947936/1‑150        GGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGTGTCGC                                                                                                                                                       <  2:384912/150‑1            GGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG                                                                                                                                                   >  1:1866218/1‑150                                                                                            CCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGC                                                                   >  2:2214588/1‑150                                                                                             CATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTG                                                                           <  1:343837/141‑1                                                                                             CATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTG                                                                           >  2:343837/1‑141                                                                                                      ACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTG                                                         >  1:920559/1‑150                                                                                                        AAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGT                                                       >  1:861635/1‑150                                                                                                           GTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACT                                                    >  1:821300/1‑150                                                                                                                TCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGACCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAG                                               >  1:1015572/1‑150                                                                                                                   CACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCATTGTGTCGCGAGGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGGAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCGAGCGC                                            >  1:1112259/1‑150                                                                                                                           GAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTC                                    <  2:920559/150‑1                                                                                                                                                   CCTTGTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATT            >  2:2243080/1‑150                                                                                                                                                       GTGTCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGC        <  1:862778/150‑1                                                                                                                                                          TCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA                                                                       <  2:1765678/84‑1                                                                                                                                                          TCGCGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAA                                                                       >  1:1765678/1‑84                                                                                                                                                          TCGCGATGGGCTGCAAAGCAGCCCCCAGAGCCCGCAAATCAGACCCAGGAATGCAGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCTCACCGGGTCCTGCAGGTTGTGCACCCGGGCATTCCCCCAG     >  2:915638/1‑150                                                                                                                                                             CGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGG  <  2:1803802/150‑1                                                                                                                                                             CGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGG  <  2:1015572/150‑1                                                                                                                                                             CGATGGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGG  <  1:525814/150‑1                                                                                                                                                                                                                                                                                                                    ACCACGCGGTGGGCGCTTACCACCTTAACGGCACCCTGCCTGCGCGGCATTCCTGGATCTGATTTGCGGGCCCTGGGGGCTGCTTTGCAGCCCATCGCGACACAAGGTCGCTCCCACAAGTAGAGCGCAGTTTCCTGTGGGAGCGGCCTTGTGTCGCGATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/277325‑277165 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgtgtcgcgatgGGCTGCAAAGCAGCCCCCAGGGCCCGCAAATCAGATCCAGGAATGCCGCGCAGGCAGGGTGCCGTTAAGGTGGTAAGCGCCCACCGCGTGGTACTTCCAGCGCACCGGGTCGTGCAGGGTGTGCACCCGGGCATTTCGCCAGTGG  >  NC_002947/277234‑277378

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.