| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 304450 | 75 (0.850) | 5 (0.060) | 5/236 | NT | 7.1% | coding (321/621 nt) | PP_0249 | hypothetical protein |
| ? | NC_002947 | = 304473 | 58 (0.680) | coding (298/621 nt) | PP_0249 | hypothetical protein | |||||
AGGGTGAACTCCACCTCCCACACACCATCACCCAGCGCCAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/304298‑304450‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGTGCAGTTGCGCCACCGCCGCTGCGAGGCACCGTTGGTGACGATGAAAACCATCAAGAGCTCCAACGGCCACGCCCAGACCCGCTACGTCATCCGCACGTCACTGGCGCTGGGTG < NC_002947/304473‑304326 AGGGTGAACTCCACCTCCCACACACCATCACCCAGCGCCAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAG > 2:1703194/1‑150 GGTGAACTCCACCTCCCACACACCATCACCCAGCGCCAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCC > 1:107525/1‑150 GGTGAACTCCACCTCCCACACACCATCACCCAGCGCCAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCC < 2:107525/150‑1 CAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCCTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGT < 1:1703194/150‑1 ATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCCTGGGTTCGCTTCACTGCGCACCTG > 1:1343925/1‑87 ATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCCTGGGTTCGCTTCACTGCGCACCTG < 2:1343925/87‑1 TTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCCTGGGTTCGCTTCACTGCGCACCTGGGCT < 1:2236777/86‑1 TTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCCTGGGTTCGCTTCACTGCGCACCTGGGCT > 2:2236777/1‑86 AGCCCTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGTGCAGTTGCGCCACCGCCGCTGCGAGGCACCGTTGGTGACGATGAAAACCATCAAGAGCTCCAACGGCCACGCCCAGACCCGCTACGTCATCCGCACGTCACTGGCGCTGG < 2:1157544/150‑1 CCTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGTGCAGTTGCGCCACCGCCGCTGCGAGGCACCGTTGGTGACGATGAAAACCATCAAGAGCTCCAACGGCCACGCCCAGACCCGCTACGTCATCCGCACGTCACTGGCGCTGGGTG > 1:1125843/1‑150 CCTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGTGCAGTTGCGCCACCGCCGCTGCGAGGCACCGTTGGTGACGATGAAAACCATCAAGAGCTCCAACGGCCACGCCCAGACCCGCTACGTCATCCGCACGTCACTGGCGCTGGGTG > 1:589089/1‑150 AGGGTGAACTCCACCTCCCACACACCATCACCCAGCGCCAGTGACGTGCGGATGACGTAGCGGGTCTGGGCGTGGCCGTTGGAGCTCTTGATGGTTTTCATCGTCACCAACGGTGCCTCGCAGCGGCGGTGGCGCAACTGCACCACCGAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/304298‑304450‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agcccTGGGTTCGCTTCACTGCGCACCTGGGCTCGGTGGTGCAGTTGCGCCACCGCCGCTGCGAGGCACCGTTGGTGACGATGAAAACCATCAAGAGCTCCAACGGCCACGCCCAGACCCGCTACGTCATCCGCACGTCACTGGCGCTGGGTG < NC_002947/304473‑304326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |