| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 421630 | 66 (0.750) | 4 (0.050) | 4/228 | NT | 5.8% | coding (2321/2787 nt) | PP_0348 | hypothetical protein |
| ? | NC_002947 | = 421642 | 69 (0.840) | coding (2309/2787 nt) | PP_0348 | hypothetical protein | |||||
GGGCAGCCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/421473‑421630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgctgtATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGCTCAAGCGCAAAGCCGACGGGCAGTGGGTCATCGACTCACCG < NC_002947/421642‑421497 GGGCAGCCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGAGGTT > 1:785362/1‑150GGGCAGCCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGCTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTT < 2:1560452/150‑1 GCAGCCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGT < 1:189303/150‑1 CCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCT < 2:2015268/150‑1 TCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGC < 1:686557/124‑1 TCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGGCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGC > 2:686557/1‑124 GCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGTATTTCGTCAAGGACAGCGACAAC < 1:850113/99‑1 GCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGTATTTCGTCAAGGACAGCGACAAC > 2:850113/1‑99 TCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGTATTTCGTCAAGGACAGC < 1:1963939/67‑1 TCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGTATTTCGTCAAGGACAGC > 2:1963939/1‑67 TCGCTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGCTCAAGCGCAAAGCCGACGGGCAGTGGGTCATCGACTCA < 1:1243328/150‑1 CTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGCTCAAGCGCAAAGCCGACGGGCAGTGGGTCATCGACTCACCG < 1:1302278/150‑1 CTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGC > 1:934289/1‑109 CTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGC < 2:934289/109‑1 CTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTAT > 1:1245041/1‑96 CTGTATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTAT < 2:1245041/96‑1 GGGCAGCCCGTCGTACCAGAGCACCGGTGAGTCGATGACCCACTGCCCGTCGGCTTTGCGCTTGAGCGGTTGCTGCAGATAGGCATCTGGCTGGTCAGGGTCAATGGCTCGCCAGCGGTAGCCGTCGAAGCTGACCTGGTAGTAGCGGTTGTCGCTGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/421473‑421630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgctgtATTTCGTCAAGGACAGCGACAACCGCTACTACCAGGTCAGCTTCGACGGCTACCGCTGGCGAGCCATTGACCCTGACCAGCCAGATGCCTATCTGCAGCAACCGCTCAAGCGCAAAGCCGACGGGCAGTGGGTCATCGACTCACCG < NC_002947/421642‑421497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |