New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	626429 =	76 (0.860)	5 (0.060)	5/236	NT	6.6%	coding (99/816 nt)	mtfA	glucose‑regulated peptidase
	?	NC_002947	626468 =	69 (0.810)					coding (60/816 nt)	mtfA	glucose‑regulated peptidase

GGGCGCCTGGGCCGTACGGCCAAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/626580‑626429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAG  >  NC_002947/626468‑626616                                                                                                                                                                                                                                                                                                                gtgaGCCTTGGCCGTACGGCCCAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATGC                                                                                                                                                         >  2:400390/5‑150                  GGCCAAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATG                                                                                                                                                          <  1:2084703/132‑1                  GGCCAAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATG                                                                                                                                                          >  2:2084703/1‑132                     CAAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCATTGGCA‑GCCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACG                                                                                                                                     >  2:445870/1‑150                        GGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCATTGGCA‑GCCGCTCGCGTACGGCCTGCCATTGCTGTGGCGTGATCGGGTAACGCGC                                                                                                                                  <  1:445870/150‑1                                                                                                                CACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGC                                          >  1:2371468/1‑150                                                                                                                            AGGCCGTACGCGAGCGG‑CTGCCAATGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAAT                                                                                                   >  1:1161497/1‑81                                                                                                                            AGGCCGTACGCGAGCGG‑CTGCCAATGCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAAT                                                                                                   <  2:1161497/81‑1                                                                                                                                                      GCTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGA     <  1:1055312/150‑1                                                                                                                                                       CTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCA                                 <  1:2399358/121‑1                                                                                                                                                       CTGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCA                                 >  2:2399358/1‑121                                                                                                                                                        TGTGGCGTGATCGGGTAACGCGCCTGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCGGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACA   >  1:1055114/1‑150                                                                                                                                                        TGTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACA   <  2:2051002/150‑1                                                                                                                                                         GTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAG  <  1:692635/150‑1                                                                                                                                                                                                                                                                                                                GGGCGCCTGGGCCGTACGGCCAAGGCTCACTGAACAGGTAAAGAACGAACGGCATGTGGTCATTCAGCGCCTGGCGGCGCAAGCGTACTCTGGCGCGTTACCCGATCACGCCACAGCAATGGCAGGCCGTACGCGAGCGG‑CTGCCAATGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/626580‑626429 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgTGGCGTGATCGGGTAACGCGCCAGAGTACGCTTGCGCCGCCAGGCGCTGAATGACCACATGCCGTTCGTTCTTTACCTGTTCAGTGAGCCTTGGCCGTACGGCCCAGGCGCCCACGCAGCAAGCCGAGAATCATCGGCACCAGCGACAG  >  NC_002947/626468‑626616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.