| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 703346 | 78 (0.880) | 7 (0.080) | 7/234 | NT | 8.9% | coding (82/660 nt) | PP_0598 | paraquat‑inducible protein A |
| ? | NC_002947 | = 703362 | 70 (0.830) | coding (98/660 nt) | PP_0598 | paraquat‑inducible protein A | |||||
GACAGCGTCGCCTCCCATAATTCGAGTCAGAACACTAGAATAGCCCCCACGCACCTATACAGAAGCGCTCTATGTCCAATTCTGTCGAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/703194‑703346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcAGCACGGGCTTGCGCAGCAGCAGGTCGCATTCATGGCAGGCGACAAGCTCGTCCAACGGCAGCTGGGCCAGGGTTTCAGGTTCGA < NC_002947/703362‑703278 GACAGCGTCGCCTCCCATAATTCGAGTCAGAACACTAGAATAGCCCCCACGCACCTATACAGAAGCGCTCTATGTCCAATTCTGTCGAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGC > 1:750513/1‑150 CGAGTCAGAACACTAGAATAGCCCCCACGCACCTATACAGAAGCGCTCTATGTCCAATTCTGTCGAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGCAGCACGGGCTTGCGCAGCA < 1:2389696/150‑1 CTCTATGTCCAATTCTGTCGAACCTGAAGCCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGCAGCACGGGCTTGCGCAGCAGCAGGTC < 1:1917519/112‑1 CTCTATGTCCAATTCTGTCGAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGCAGCACGGGCTTGCGCAGCAGCAGGTC > 2:1917519/1‑112 GAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGCAGCACGGGCTTGCGCAGCAGCA > 1:971184/1‑89 GAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGCAGCACGGGCTTGCGCAGCAGCA < 2:971184/89‑1 CCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGACCTGCTGCTGCAGCACGGGCTTGCGCAGCAGCAG > 1:1530775/1‑83 CCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGACCTGCTGCTGCAGCACGGGCTTGCGCAGCAGCAG < 2:1530775/83‑1 TGCAGCACGGGCTTGCGCAGCAGCAGGTCGCATTCATGGCAGGCGACAAGCTCGTCCAACGGCAGCTGGGCCAGGGTTTCAGGTTCGA < 1:1344269/88‑1 TGCAGCACGGGCTTGCGCAGCAGCAGGTCGCATTCATGGCAGGCGACAAGCTCGTCCAACGGCAGCTGGGCCAGGGTTTCAGGTTCGA > 2:1344269/1‑88 GACAGCGTCGCCTCCCATAATTCGAGTCAGAACACTAGAATAGCCCCCACGCACCTATACAGAAGCGCTCTATGTCCAATTCTGTCGAACCTGAAACCCTGGCCCAGCTGCCGTTGGACGAGCTTGTCGCCTGCCATGAATGCGAC‑‑‑CTGCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/703194‑703346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgcAGCACGGGCTTGCGCAGCAGCAGGTCGCATTCATGGCAGGCGACAAGCTCGTCCAACGGCAGCTGGGCCAGGGTTTCAGGTTCGA < NC_002947/703362‑703278 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |