New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 941707	73 (0.820)	4 (0.050)	4/232	NT	5.2%	coding (3918/18933 nt)	PP_0806	surface adhesion protein
	?	NC_002947	= 941729	77 (0.920)					coding (3896/18933 nt)	PP_0806	surface adhesion protein

GTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/941552‑941707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccaCTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTCG  <  NC_002947/941729‑941581                                                                                                                                                                                                                                                                                                                   ggGGTGAGCGGGACTTCGAATTGCAGTGCCGACGTAGCATTGCCGCTTGCGTCGGTCTGCACCAGTCTCAATTGTTCGCCCGGCTTAGCGGCCGGGGCGAGATCAATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACG                                                                                                                                                             <  1:249701/148‑1   GGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGT                                                                                                                                                           <  2:1684024/150‑1       AGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCA                                                                                                                                                       >  1:1578978/1‑150                                   AAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGC                                                                                                                                                         <  1:2046037/120‑1                                   AAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGC                                                                                                                                                         >  2:2046037/1‑120                                                   GTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCACTGTCGACGTGCGTGATGCCAATGGCACC                                                                                                                          <  1:2064458/135‑1                                                   GTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCACTGTCGACGTGCGTGATGCCAATGGCACC                                                                                                                          >  2:2064458/1‑135                                                                                                GGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCACTGTCGACGTGCGTGATGCCAATGTCA                                                                                                                            >  1:1168162/1‑88                                                                                                GGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCACTGTCGACGTGCGTGATGCCAATGGCA                                                                                                                            <  2:1168162/88‑1                                                                                                                                                      GGTGCCACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCT        <  1:1462401/150‑1                                                                                                                                                         GCCACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCC     <  1:865278/150‑1                                                                                                                                                         GCCACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCC     <  2:2229543/150‑1                                                                                                                                                           CACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACTCAAGCGGCAATGCTTCCTC   >  2:1590418/1‑150                                                                                                                                                           CACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTC   <  2:144329/150‑1                                                                                                                                                           CACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTC   >  2:1911470/1‑150                                                                                                                                                           CACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTC   >  1:877174/1‑150                                                                                                                                                           CACTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTACCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTC   >  2:2199272/1‑150                                                                                                                                                            ACTGTCGCGGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCCCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTCG  <  2:606536/150‑1                                                                                                                                                                                                                                                                                                                   GTGGTGAGCGGGACTTCGAATTGCAGTGCCGAGGAAGCATTGCCGCTTGCGTCGGTCTGCACCAGGCTCAATTGTTCGCCCGGCTGAGCGGCCGGGGCGAGATCGATCAGGAAGGTGCCGTTGGCACCGACCACACCCGTGCCGATCACGGTGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/941552‑941707 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgccaCTGTCGACGTGCGTGATGCCAATGGCACCGTGATCGGCACGGGTGTGGTCGGTGCCAACGGCACCTTCCTGATCGATCTCGCCCCGGCCGCTCAGCCGGGCGAACAATTGAGCCTGGTGCAGACCGACGCAAGCGGCAATGCTTCCTCG  <  NC_002947/941729‑941581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.