New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1184226 =	86 (0.970)	6 (0.070)	5/238	NT	6.2%	coding (165/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F
	?	NC_002947	1184281 =	97 (1.130)					coding (110/1458 nt)	mltF	membrane‑bound lytic murein transglycosylase F

CTGCTTTGCGCCAGCGTTGCGCCAAATGGCTTCTCGCAACCGGACTCTTTCTGCTGCTAGGTGCCTGCGTTGAAAAACCCAGCACCCTCGAGCGCGTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1184377‑1184226 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAAGCAGTGTGGGCGAACATAGGTTGCAGTATACGCAAAGGACTGGCCCAACCATAT  >  NC_002947/1184281‑1184427                                                                                                                                                                                                                                                                                                             CTGCTTTGCGCCAGCGTTGCGCCAAATGGCTTCTCGCAACCGGACTCTTTCTGCTGCTAGGTGCCTGCGTTGAAAAACCCAGCACCCTCGAGCGCGTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACT                                                                                                                                                       <  1:565560/150‑1  TGCTTTGCGCCAGCGTTGCGCCAAATGGCTTCTCGCAACCGGACTCTTTCTGCTGCTAGGTGCCTGCGTTGAAAAACCCAGCACCCTCGAGCGCGTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTT                                                                                                                                                      >  1:2152554/1‑150                                                                                                GTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAA                                                        >  1:1553685/1‑150                                                                                                GTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGC                                                             >  1:1246330/1‑145                                                                                                GTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGC                                                             <  2:1246330/145‑1                                                                                                   AAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGC                                                                        <  1:1539039/131‑1                                                                                                   AAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGC                                                                        >  2:1539039/1‑131                                                                                                           TGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAAGCAGTGTGAGC                                             <  2:1553685/150‑1                                                                                                                                                     CTTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAAGCAGTGTGGGCGAACATAGGTTGCAGTATACGCAAAGGACTGGCCCAACCATA   >  1:1779683/1‑150                                                                                                                                                      TTCACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAAGCAGTGTGGGCGAACATAGGTTGCAGTATACGCAAAGGACTGGCCCAACCATAT  >  2:281755/1‑150                                                                                                                                                                                                                                                                                                             CTGCTTTGCGCCAGCGTTGCGCCAAATGGCTTCTCGCAACCGGACTCTTTCTGCTGCTAGGTGCCTGCGTTGAAAAACCCAGCACCCTCGAGCGCGTGAAGGAGGATGGCGTGCTGCGCGTGATCACACGCAACAGCCCGGCAACCTACTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1184377‑1184226 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cttcACGCGCTCGAGGGTGCTGGGTTTTTCAACGCAGGCACCTAGCAGCAGAAAGAGTCCGGTTGCGAGAAGCCATTTGGCGCAACGCTGGCGCAAAGCAGTGTGGGCGAACATAGGTTGCAGTATACGCAAAGGACTGGCCCAACCATAT  >  NC_002947/1184281‑1184427

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.