New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 125822890 (1.020)9 (0.110) 7/236 NT 9.3% coding (137/261 nt) PP_1101 hypothetical protein
?NC_002947 = 1258246 89 (1.050)coding (155/261 nt) PP_1101 hypothetical protein

AAGTAACGCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1258075‑1258228
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGGTGCGCCAGCAGTGACCAGGGCAACAACCCAACGTGATTGGGCTGCAGGCCTGCCAGCTTGGCACTGATTGCGGGATGGAGTTTCATTGGCTGCTCCTGACGAAAGCCGATG  <  NC_002947/1258246‑1258100
                                                                                                                                                                                                                                                                                                             
AAGTAACGCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGC                                                                                                                                                         <  2:2334493/150‑1
                 ATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCAC                                                                                                                                          <  1:1360153/148‑1
                 ATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCAC                                                                                                                                          >  2:1360153/1‑148
                                TTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCACGCCCCCCGCCTGCATGG                                                                                                                         <  1:1247115/150‑1
                                                               CCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCACGCCCCCCGCCTGCATG                                                                                                                          <  1:1920617/118‑1
                                                               CCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCACGCCCCCCGCCTGCATG                                                                                                                          >  2:1920617/1‑118
                                                                            CAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCGG‑‑GGGGCACGCCCCCCGCC                                                                                                                                >  1:993625/1‑97
                                                                            CAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCGG‑‑GGGGCACGCCCCCCGCC                                                                                                                                <  2:993625/97‑1
                                                                                       GCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGG                                                                                                                 <  1:233266/103‑1
                                                                                       GCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGCTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGG                                                                                                                 >  2:233266/1‑103
                                                                                                                                                     CAGGCTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGGTGCGCCAGCAGTGACCAGGGCAACAACCCAACGTGATTGGGCTGCAGGCCTGCCAGCTTGGCACTGATTGCGGGATGGAGTTTCATTGGCTGCTCCTGACGAAAGCCGA    <  1:893964/150‑1
                                                                                                                                                     CAGGCTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGGTGCGCCAGCAGTGACCAGGGCAACAACCCAACGTGATTGGGCTGCAGGCCTGCCAGCTTGGCACTGATTGCGGGATGGAGTTGCATTGGCTGCTCCTGACGAAAGCCGA    <  2:1166381/150‑1
                                                                                                                                                       GGCTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGGTGCGCCAGCAGTGACCAGGGCAACAACCCAACGTGATTGGGCTGCAGGCCTGCCAGCTTGGCACTGATTGCGGGATGGAGTTTCATTGGCTGCTCCTGACGAAAGCCGATG  >  1:118717/1‑150
                                                                                                                                                                                                                                                                                                             
AAGTAACGCCGGTGTGCATGATGTGCATCGGCTTTCGTCAGGAGCAGCCAATGAAACTCCATCCCGCAATCAGTGCCAAGCTGGCAGGCCTGCAGCCCAATCACGTTGGGTTGTTGCCCTGGTCACTGCTGGCGCACCCGCTGCCCATGCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1258075‑1258228
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcTGATGGGGCACGCCCCCCGCCTGCATGGGCAGCGGGTGCGCCAGCAGTGACCAGGGCAACAACCCAACGTGATTGGGCTGCAGGCCTGCCAGCTTGGCACTGATTGCGGGATGGAGTTTCATTGGCTGCTCCTGACGAAAGCCGATG  <  NC_002947/1258246‑1258100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.