| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1283232 | 70 (0.790) | 7 (0.080) | 8/238 | NT | 8.6% | coding (184/483 nt) | PP_1119 | hypothetical protein |
| ? | NC_002947 | = 1283246 | 81 (0.950) | coding (170/483 nt) | PP_1119 | hypothetical protein | |||||
GCGGTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1283080‑1283232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAAGAC < NC_002947/1283246‑1283098 GCGGTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTC > 2:983197/1‑150GCGGTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTC < 2:469205/150‑1GCGGTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTC < 1:276935/150‑1 GTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAG < 2:1228462/150‑1 TGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTC > 1:1977154/1‑143 TGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTC < 2:1977154/143‑1 TCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGC > 1:210330/1‑150 CTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGCCGGCCTG < 2:210330/150‑1 TCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCGGCACGGTCCAGCCCAGCAAGCCGGCCTGGA > 2:1169303/1‑111 TTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGCCGGCCTGGACCG > 1:315691/1‑94 TTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGCCGGCCTGGACCG < 2:315691/94‑1 GGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAG > 2:1449193/1‑52 GGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAG < 1:1449193/52‑1 CCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGCCGGCCTGGACCGT > 2:1222389/1‑68 CCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAGCCCAGCAAGCCGGCCTGGACCGT < 1:1222389/68‑1 TCCAGGCCGGCTTGCTGGGCTGGACCGTGCCGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGA > 1:1169303/1‑111 CCAGCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAA < 1:314389/150‑1 AGCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAAGA > 1:115367/1‑150 GCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAAGAC < 2:949892/150‑1 GCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGAACATTTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGATGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAAGAC > 1:1999845/1‑150 GCGGTGCTGATGATCGCCGTCTTGGTCGTGCCAGCGCGCGGTGAAGGTGACGAAGCTGTGCTCGGGTTGGCCGCCCAGCACTTCTGCGCTTTCCACCTCCAGGCCCAGCCAGGTGCTCTGTGCACTCCAGTCGGCCATGGCAGCACGGTCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1283080‑1283232‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagCCCAGCAAGCCGGCCTGGACCGTGCTGCCATGGCCGACTGGAGTGCACAGAGCACCTGGCTGGGCCTGGAGGTGGAAAGCGCAGAAGTGCTGGGCGGCCAACCCGAGCACAGCTTCGTCACCTTCACCGCGCGCTGGCACGACCAAGAC < NC_002947/1283246‑1283098 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |