New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1448707 =97 (1.100)6 (0.070) 4/236 NT 6.2% coding (420/861 nt) PP_1266 fusaric acid resistance protein
?NC_002947 1448777 = 88 (1.040)coding (490/861 nt) PP_1266 fusaric acid resistance protein

CGTAAACCCAGAACGAATTCTCGTCGACCACCGCCATCACCGCTTCACCGGTACGCGCATAGTCGCCCTTGTGGATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1448858‑1448707
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGCCGCATGTGAAGGT  >  NC_002947/1448777‑1448895
                                                                                                                                                                                                                                                                               
CGTAAACCCAGAACGAATTCTCGTCGACCACCGCCATCACCGCTTCACCGGTACGCGCATAGTCGCCCTTGTGGATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCA                                                                                                                           >  1:2179289/1‑150
 GTAAACCCAGAACGAATTCTCGTCGACCACCGCCATCACCGCTTCACCGGTACGCGCATAGTCGCCCTTGTGGATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGATTCAGCTCGGCTGCGACCAA                                                                                                                          >  2:965906/1‑150
                                                                          ATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGACGGCGGTGGTCGACGAGAATTCGTTC                                                 >  2:2050238/1‑150
                                                                          ATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGAGACTATGCACGTAATGGAGCAGCGTGGACGGCGGTGGACGACGAGAATTCGTTC                                                 >  2:1468789/1‑150
                                                                             TTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGACGGCGGTGGTCGACGAGAATTCGTTCTGG                                              <  1:1468789/150‑1
                                                                             TTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGACGGCGGTGGTCGACGAGAATTCGTTCTGG                                              <  1:2050238/150‑1
                                                                                      GTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGG                                     >  2:1389524/1‑150
                                                                                         ACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTC                                  <  1:1389524/150‑1
                                                                                                                                                   CCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGCCGCATGTGAAGGT  <  1:2317412/124‑1
                                                                                                                                                   CCAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGCCGCATGTGAAGGT  >  2:2317412/1‑124
                                                                                                                                                    CAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGC               >  1:396858/1‑110
                                                                                                                                                    CAACCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGC               <  2:396858/110‑1
                                                                                                                                                                                                                                                                               
CGTAAACCCAGAACGAATTCTCGTCGACCACCGCCATCACCGCTTCACCGGTACGCGCATAGTCGCCCTTGTGGATATTCAGGTTGGTCACATAGCCGTCAACCGTCGCCACGATGTGCGTACGCTTGAGGTTCAGCTCGGCTGCGGCCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1448858‑1448707
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaacCTGAATATCCACAAGGGCGACTATGCGCGTACCGGTGAAGCGGTGATGGCGGTGGTCGACGAGAATTCGTTCTGGGTTTACGGGTTCTTCGAGGAGACCAAGCTGCCGCATGTGAAGGT  >  NC_002947/1448777‑1448895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.