New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 169503996 (1.080)6 (0.070) 6/236 NT 5.8% coding (963/1275 nt) wspC biofilm formation methyltransferase WspC
?NC_002947 = 1695092 103 (1.210)coding (1016/1275 nt) wspC biofilm formation methyltransferase WspC

GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1694886‑1695039
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA  <  NC_002947/1695092‑1694944
                                                                                                                                                                                                                                                                                                               
GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGG                                                                                                                                                           <  1:157004/150‑1
                CAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCA                                                                                                                                           >  1:2375921/1‑150
                                                   ACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAA                                                                                                        >  2:2232842/1‑150
                                                          TATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTG                                                                                                 <  1:2232842/150‑1
                                                               GCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCC                                                                                            <  2:2375921/150‑1
                                                                                   CTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGG                                                                                     <  1:1975280/137‑1
                                                                                   CTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGG                                                                                     >  2:1975280/1‑137
                                                                                                                                                     GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG      <  1:719947/150‑1
                                                                                                                                                     GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTAGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG      >  2:327244/1‑150
                                                                                                                                                     GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCGGGGTTTGCTGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG      >  1:1497604/1‑150
                                                                                                                                                     GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAAATCGCTGGCCCCCTCGTTGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG      <  1:892674/150‑1
                                                                                                                                                     GGGCCTGCTCGCGGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTTGGCTGCG      <  1:1001561/150‑1
                                                                                                                                                       GCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTTGTGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCTACGGCACACTGGGCTGCGGA    <  2:884858/150‑1
                                                                                                                                                       GCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGA    >  1:2265068/1‑150
                                                                                                                                                       GCCTGCTCGCTGGCACCGGCATTGGCAAGACGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGA    >  1:1044698/1‑150
                                                                                                                                                         CTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA  >  2:76225/1‑150
                                                                                                                                                                                                                                                                                                               
GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/1694886‑1695039
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA  <  NC_002947/1695092‑1694944

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.