New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1695039 | 96 (1.080) | 6 (0.070) | 6/236 | NT | 5.8% | coding (963/1275 nt) | wspC | biofilm formation methyltransferase WspC |
? | NC_002947 | = 1695092 | 103 (1.210) | coding (1016/1275 nt) | wspC | biofilm formation methyltransferase WspC |
GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1694886‑1695039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA < NC_002947/1695092‑1694944 GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGG < 1:157004/150‑1 CAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCA > 1:2375921/1‑150 ACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAA > 2:2232842/1‑150 TATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTG < 1:2232842/150‑1 GCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCC < 2:2375921/150‑1 CTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGG < 1:1975280/137‑1 CTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGG > 2:1975280/1‑137 GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG < 1:719947/150‑1 GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTAGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG > 2:327244/1‑150 GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCGGGGTTTGCTGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG > 1:1497604/1‑150 GGGCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAAATCGCTGGCCCCCTCGTTGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCG < 1:892674/150‑1 GGGCCTGCTCGCGGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTTGGCTGCG < 1:1001561/150‑1 GCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTTGTGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCTACGGCACACTGGGCTGCGGA < 2:884858/150‑1 GCCTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGA > 1:2265068/1‑150 GCCTGCTCGCTGGCACCGGCATTGGCAAGACGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGA > 1:1044698/1‑150 CTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA > 2:76225/1‑150 GGCGGCGGCACCCGCCCAAACTGCCAAGCGTGCGTTCACGACGTTGCCCGCACCGGTTTATCCGCAGCCCAGTGTGCCGTTGCCTCGTTCGCGGCGTGTGCTGCCGGTGGCGGCCAGGCCAGCGCGAGCCCGCGAGCACAGCCACGAGGGGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1694886‑1695039 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccTGCTCGCTGGCACCGGCATTGGCCAGCCGGGCAATGCCGGCCAGCAACTCGCTGGCCCCCTCGTGGCTGTGCTCGCGGGCTCGCGCTGGCCTGGCCGCCACCGGCAGCACACGCCGCGAACGAGGCAACGGCACACTGGGCTGCGGATA < NC_002947/1695092‑1694944 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |