New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1798642 =	106 (1.200)	10 (0.120)	8/236	NT	9.7%	coding (523/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
	?	NC_002947	1798676 =	85 (1.000)					coding (557/1128 nt)	lpxB	lipid‑A‑disaccharide synthase

CACGAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1798794‑1798642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTCGT  >  NC_002947/1798676‑1798793                                                                                                                                                                                                                                                                                 CACGAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGG                                                                                                                           >  1:147621/1‑150  ACGAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTAGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCACGCCCAGCGCGGCACGCGCGGCCGGG                                                                                                                          >  2:1125467/1‑150   CGAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGC                                                                                                                         <  1:601110/150‑1    GAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCG                                                                                                                        >  1:260525/1‑150    GAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCG                                                                                                                        >  2:143859/1‑150                                                                                                                     CCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCT                                                  <  1:152732/107‑1                                                                                                                     CCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCT                                                  >  2:152732/1‑107                                                                                                                      CTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCT      >  1:937074/1‑150                                                                                                                      CTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGC                            <  1:796702/128‑1                                                                                                                      CTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGC                            >  2:796702/1‑128                                                                                                                      CTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTG                                                                >  1:2095736/1‑92                                                                                                                      CTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTG                                                                <  2:2095736/92‑1                                                                                                                       TCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGGATTAGGGCGCTTGGGCGCGCT                                                        >  1:541976/1‑99                                                                                                                       TCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCT                                                        <  2:541976/99‑1                                                                                                                          CCCAGGCCCAGCGCGGCACGCGCGGCCGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTCGT  >  2:2377200/1‑150                                                                                                                                                                                                                                                                                 CACGAAGCGCACACCCGGCACTTGTTGGCTGAGGCGCTCGGCGGCGTCGAGGAACAGCGCGCCCAAGCGCCCTACTTCGCCACCCCGGCTGCCCGGCATCAACGCCACCACCGGCCCCTCGCCCAGGCCCAGCGCGGCACGCGCGGCCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1798794‑1798642 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTCGT  >  NC_002947/1798676‑1798793

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.