BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1798642 =	106 (1.200)	10 (0.120)	8/236	NT	9.7%	coding (523/1128 nt)	lpxB	lipid‑A‑disaccharide synthase
*	?	NC_002947	1798676 =	85 (1.000)	10 (0.120)	8/236	NT	9.7%	coding (557/1128 nt)	lpxB	lipid‑A‑disaccharide synthase

Only 100 of 119 total aligned reads displayed.

AGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTC  >  NC_002947/1798499‑1798791

aGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCGGACGCTGCTGCTGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCgg                                                                                                                                                 <  2:1041833/150‑1 (MQ=255)

 gAAGCTCGAGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGc                                                                                                                                                >  2:835504/1‑150 (MQ=255)

       cgTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCcgcgcg                                                                                                                                          <  1:1154040/150‑1 (MQ=255)

           cTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGcc                                                                                                                                      >  1:855824/1‑150 (MQ=255)

            tGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCcg                                                                                                                                     >  2:1346297/1‑150 (MQ=255)

                   ccGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCTCCCGCTGGCAGACACCATACCGCTTGAAGTCGCCCGCCCGGCCGCGCGTGCCGCGctggg                                                                                                                              <  2:1357618/150‑1 (MQ=255)

                    cgcgAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggc                                                                                                                             >  1:867837/1‑150 (MQ=255)

                     gcgAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggcc                                                                                                                            >  1:816408/1‑150 (MQ=255)

                      cgAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggcct                                                                                                                           >  2:1594694/1‑150 (MQ=255)

                         acgaagcgcacacccggcacttgttggctgaggcgctcggcggcgtcgaggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGctgggcctggg                                                                                                                        >  2:2377200‑M1/119‑150 (MQ=255)

                         aGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggcctgtg                                                                                                                        >  2:792606/1‑148 (MQ=255)

                            cTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGa                                                                                                                     <  1:273667/150‑1 (MQ=255)

                             tGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    >  2:1735754/1‑150 (MQ=255)

                             tGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    >  2:613275/1‑150 (MQ=255)

                             tGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTG‑AGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAgg                                                                                                                   >  1:970428/1‑150 (MQ=255)

                             agcgcacacccggcacttgttggctgaggcgctcggcggcgtcgaggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    >  1:937074‑M1/115‑150 (MQ=255)

                              gCGACCTGATGCTGATGCTGCTGCCGTTCGCCGCGCGCTTCTACGAAGATCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAgg                                                                                                                   <  1:539761/150‑1 (MQ=255)

                                     gATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCggt                                                                                                            <  2:867837/150‑1 (MQ=255)

                                      aTGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCggtg                                                                                                           <  2:1287523/150‑1 (MQ=255)

                                          tGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggcctgg                                                                                                                         <  2:2262275/132‑1 (MQ=255)

                                          tGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgggcctgg                                                                                                                         >  1:2262275/1‑132 (MQ=255)

                                            aCGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCg                                                                                                     >  1:98504/1‑150 (MQ=255)

                                                tgctgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGa                                                                                                 >  2:2158942/1‑150 (MQ=255)

                                                tgctgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGa                                                                                                 >  1:327257/1‑150 (MQ=255)

                                                 gctgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGAt                                                                                                >  1:1019236/1‑150 (MQ=255)

                                                 gctgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGAGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGAt                                                                                                <  1:127326/150‑1 (MQ=255)

                                                   tgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCCCCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCCCTGGGCCTGGGCGAGGGGCCGCTGGCGGCCTTGAGGc                                                                                              >  2:942615/1‑150 (MQ=255)

                                                   tgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGc                                                                                              >  2:1166351/1‑150 (MQ=255)

                                                   tgcCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGGGCGTTGTGTCGGCCCCTCGCTGGCAGACACCATACCGCTTGAAGCCGACCCACCGGCCCCGCGTGCCGCGCTCGGCCGGGCTGAGGGGCCGGTGGTGGGGTtgctgc                                                                                              >  2:2329046/1‑150 (MQ=255)

                                                   gctgaggcgctcggcggcgtcgaggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    >  2:796702‑M1/93‑128 (MQ=255)

                                                   gctgaggcgctcggcggcgtcgaggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    <  1:796702‑M1/36‑1 (MQ=255)

                                                        ttCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGc                                                                                         >  2:1215823/1‑150 (MQ=255)

                                                           gAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCg                                                                                                              >  1:1257561/1‑126 (MQ=255)

                                                           gAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGc                                                                                                      <  1:2267465/134‑1 (MQ=255)

                                                            aGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGt                                                                                                                                         <  2:1534802/98‑1 (MQ=255)

                                                            aGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGt                                                                                                                                         >  1:1534802/1‑98 (MQ=255)

                                                               cgcgGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCggg                                                                                  <  1:2047186/150‑1 (MQ=255)

                                                                   gTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTgg                                                                              <  1:2158942/150‑1 (MQ=255)

                                                                      cTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgg                                                                                                                               <  1:2131004/98‑1 (MQ=255)

                                                                      cTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGctgg                                                                                                                               >  2:2131004/1‑98 (MQ=255)

                                                                       tACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGaa                                                                          >  1:475645/1‑150 (MQ=255)

                                                                         cGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGt                                                                        >  1:38399/1‑150 (MQ=255)

                                                                         cGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGt                                                                        >  1:1137554/1‑150 (MQ=255)

                                                                         aggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAgg                                                                                                                   >  2:152732‑M1/71‑107 (MQ=255)

                                                                         aggaacagcgcgcccaagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAgg                                                                                                                   <  1:152732‑M1/37‑1 (MQ=255)

                                                                          gAAGAGCAGGGTGTGCCAGTGCGTTTTGTGGGCCACGCGGTGGCAGACACCCAACCGCTTGAAGCCGCCCGCCGGGCAGCGCGTGCCGACATGGCACTAGGCAAGGGGCCGGGGGTGACCTTAATGCCGGGCAGCAGGGGTGGCGGAGtc                                                                       >  2:721210/1‑149 (MQ=255)

                                                                          gAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTa                                                                       >  2:1490659/1‑150 (MQ=255)

                                                                            agagCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAgg                                                                     <  1:2329046/150‑1 (MQ=255)

                                                                               gCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGgcg                                                                  >  2:840176/1‑150 (MQ=255)

                                                                               agcgcgcccaagcgccctaatccgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGa                                                                                                                     >  1:541976‑M1/65‑99 (MQ=255)

                                                                                cAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGAGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGgcgc                                                                 >  1:672014/1‑150 (MQ=255)

                                                                                   ggTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGt                                                                                                                                         <  2:1641732/75‑1 (MQ=255)

                                                                                   ggTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGa                                                                           <  1:1897581/137‑1 (MQ=255)

                                                                                   ggTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGa                                                                           >  2:1897581/1‑137 (MQ=255)

                                                                                   ggTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATAACGCTTTAAGCCGACCGCCCGGCCGCGCGt                                                                                                                                         >  1:1641732/1‑75 (MQ=255)

                                                                                       caagcgccctacttcgccaccccggctgcccggcatcaacgccaccaccggcccctCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAg                                                                                                                    >  1:2095736‑M1/57‑92 (MQ=255)

                                                                                         ccAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGgcgcg                                                        >  2:560872/1‑150 (MQ=255)

                                                                                         ccAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGAAACCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGgcgcg                                                        >  1:1331971/1‑150 (MQ=255)

                                                                                         ccAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGCTGTGGGTGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGgcgcg                                                        >  1:1954694/1‑150 (MQ=255)

                                                                                            gTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTg                                                     >  2:1752900/1‑150 (MQ=255)

                                                                                               cGTTTTCTCGGCCACCCGCTGGCAGACACACCACAGCTTACCGTCGGCCCCTCGGCCGCGCGTGCCGCGGTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTc                                                  <  1:2340763/150‑1 (MQ=255)

                                                                                                 ttttGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGgtggtg                                                                                                        >  2:392327/1‑94 (MQ=255)

                                                                                                 ttttGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGgtggtg                                                                                                        <  1:392327/94‑1 (MQ=255)

                                                                                                   ttGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCg                                              <  2:672014/150‑1 (MQ=255)

                                                                                                     gTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGAc                                            >  2:858583/1‑150 (MQ=255)

                                                                                                     gTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGAc                                            <  2:2124774/150‑1 (MQ=255)

                                                                                                      tCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATg                                                                                               <  2:1863724/98‑1 (MQ=255)

                                                                                                      tCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATg                                                                                               >  1:1863724/1‑98 (MQ=255)

                                                                                                      tCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCggg                                                                                          >  1:977667/1‑103 (MQ=255)

                                                                                                      tCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCggg                                                                                          <  2:977667/103‑1 (MQ=255)

                                                                                                         gCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGAcgccg                                        >  1:1697592/1‑150 (MQ=255)

                                                                                                           cACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACgccgcc                                      >  2:545041/1‑150 (MQ=255)

                                                                                                             cccGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGa                                    <  1:1091168/150‑1 (MQ=255)

                                                                                                             cccGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGa                                    <  1:1215823/150‑1 (MQ=255)

                                                                                                              ccGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCgg                                                                                   >  2:2231198/1‑102 (MQ=255)

                                                                                                              ccGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCg                                                                                    <  2:1461241/101‑1 (MQ=255)

                                                                                                              ccGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCg                                                                                    >  1:1461241/1‑101 (MQ=255)

                                                                                                               cGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAgc                                  <  1:1490659/150‑1 (MQ=255)

                                                                                                                gCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGAGACAAAGGGCGTATGGACGCGCGGTGCTCTGGCGCCGCCGAgcg                                 >  2:1123181/1‑150 (MQ=255)

                                                                                                                 cTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGACGCTGCGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAgcgc                                <  1:149654/150‑1 (MQ=255)

                                                                                                                    gCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCAGCGATGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTc                             >  1:2243177/1‑150 (MQ=255)

                                                                                                                          acCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCcaa                       >  2:1333504/1‑150 (MQ=255)

                                                                                                                            cATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCcaaca                     >  2:260525/1‑150 (MQ=255)

                                                                                                                             aTACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCcaacaa                    <  1:840176/150‑1 (MQ=255)

                                                                                                                             aTACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCcaacaa                    >  1:1380258/1‑150 (MQ=255)

                                                                                                                             aTACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCcaacaa                    >  1:312285/1‑150 (MQ=255)

                                                                                                                                ccGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTg                 <  1:560872/150‑1 (MQ=255)

                                                                                                                                 cGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCa                            >  1:1765225/1‑138 (MQ=255)

                                                                                                                                 cGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCa                            <  2:1765225/138‑1 (MQ=255)

                                                                                                                                 cGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGc                <  2:1209673/150‑1 (MQ=255)

                                                                                                                                    ttGAAGCCGGCAGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCgg             <  1:1100224/150‑1 (MQ=255)

                                                                                                                                    ttGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGgc                                                           <  2:648468/104‑1 (MQ=255)

                                                                                                                                    ttGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGgc                                                           >  1:648468/1‑104 (MQ=255)

                                                                                                                                    ttGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCgg             <  1:1735754/150‑1 (MQ=255)

                                                                                                                                    ttGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCgg             <  2:447700/150‑1 (MQ=255)

                                                                                                                                    ttGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCgg             <  1:1123181/150‑1 (MQ=255)

                                                                                                                                    cttgaGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCgg             <  2:970428/146‑1 (MQ=255)

                                                                                                                                        aGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGgtgt         <  2:38399/150‑1 (MQ=255)

                                                                                                                                              ccGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCtt   <  2:1137554/150‑1 (MQ=255)

                                                                                                                                               CGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTc  >  2:143859‑M1/1‑150 (MQ=255)

AGAAGCGCGTGCTGAAGATCCGCGAAGGCTGCGACCTGATGCTGACGCTGCTGCCGTTCGAGGCGCGGTTCTACGAAGAGCAGGGTGTGCCAGTGCGTTTTGTCGGCCACCCGCTGGCAGACACCATACCGCTTGAAGCCGACCGCCCGGCCGCGCGTGCCGCGCTGGGCCTGGGCGAGGGGCCGGTGGTGGCGTTGATGCCGGGCAGCCGGGGTGGCGAAGTAGGGCGCTTGGGCGCGCTGTTCCTCGACGCCGCCGAGCGCCTCAGCCAACAAGTGCCGGGTGTGCGCTTC  >  NC_002947/1798499‑1798791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.