| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1799893 = | 106 (1.200) | 8 (0.110) | 8/200 | NT | 8.7% | intergenic (+21/‑166) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha |
| ? | NC_002947 | 1799981 = | 81 (1.130) | intergenic (+109/‑78) | rnhB/dnaEA | ribonuclease HII/DNA polymerase III subunit alpha | |||||
TGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1800059‑1799893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTG > NC_002947/1799981‑1800121 TGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGC‑TTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGG > 1:5392/1‑150 GGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGGCCGCTCCCACAGGTACGGCCCCGCCGCTGAGACCGATGAATCCTGTTAGAGCGGG > 2:630562/1‑150 GGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGG > 1:1821260/1‑150 GAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGC > 2:1545113/1‑150 GAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCACTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGC > 2:768181/1‑150 AGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGT > 1:978052/1‑150 AGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCGCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGT < 2:166674/150‑1 GATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTG > 2:1892973/1‑150 CCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCC > 1:501430/1‑150 CTGTAGCGGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCG > 2:2022904/1‑150 GCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG < 1:682120/150‑1 GCAGTGCGTAACGACAAGGGCGGGATGGTAGCCTAACGAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCGGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG < 1:951159/150‑1 CAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGG > 2:994113/1‑150 AGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTGCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGCCCGATCAATCCTGTCAGAGCGGGCGTGCCCGCGAAGGG < 2:1954938/150‑1 TAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGG < 1:346481/143‑1 TAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGG < 1:346856/143‑1 TAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGG > 2:346481/1‑143 TAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGG > 2:346856/1‑143 ATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG > 2:1245075/1‑126 ATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAG < 1:1245075/126‑1 TAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGG > 2:1670684/1‑108 TAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGG < 1:1670684/108‑1 GGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGG < 1:2062526/95‑1 GGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGG > 2:2062526/1‑95 GCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTC > 2:1882157/1‑150 CCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCC > 2:360351/1‑150 CCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCA > 2:728552/1‑150 CCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCG < 1:728552/150‑1 CCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCT > 1:228850/1‑101 CCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCT < 2:228850/101‑1 GTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCT < 1:360351/150‑1 CCTGTGAGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTC < 1:1882157/150‑1 ttcGCGGGCACGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGC < 1:1102877/124‑1 ttcGCGGGCACGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGC > 2:1102636/4‑127 ttcGCGGGCACGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGC < 1:1102636/124‑1 GGCGTGCCGGCGAAGGGCAGCAAAGCAGCCCCAAAAAAAGCCCCCAGTTAGGCTAAAATCCCGCCCTTGTCGTGAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCTCTCCGAATTCTCGCTGGTCGAC < 2:772253/150‑1 gcggtCCCGCGAAGGGCTGAAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTTTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACG < 2:682120/145‑1 CCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTG < 1:166674/150‑1 CCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTGCAGGATCGTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGG > 1:2097305/1‑150 GCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTG < 2:628231/150‑1 TGGAAGATCCTGTAGCAGTGCTTAACGACAAGGGCGGGATTGTAGCCTAACTAGGGGCTTTTTTTGGGGCTGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCCCACAGGTACGGCCCCGCCGCTCAGACCGATGAATCCTGTGAGAGCGGGCGTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1800059‑1799893‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggcgtgcccgcgaagggcTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATGTCGGTTCCCTTCGTTCACCTGCGCGTCCACTCCGAATTCTCGCTGGTCGACGGCCTGGTG > NC_002947/1799981‑1800121 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |