New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1799893 =106 (1.200)8 (0.110) 8/200 NT 8.7% intergenic (+21/‑166) rnhB/dnaEA ribonuclease HII/DNA polymerase III subunit alpha
?NC_002947 1799981 = 81 (1.130)intergenic (+109/‑78) rnhB/dnaEA ribonuclease HII/DNA polymerase III subunit alpha

Only 100 of 194 total aligned reads displayed.

GGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCA  >  NC_002947/1799744‑1800041
                                                                                                                                                     |                                                                                                                                                     
cgccacccgACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGG                                                                                                                                                       <  2:1621551‑M1/146‑1 (MQ=255)
   tACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCC                                                                                                                                                    <  2:2095467‑M1/150‑1 (MQ=255)
     cccGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑T                                                                                                                                                 >  2:1975671‑M1/1‑150 (MQ=255)
      ccGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TC                                                                                                                                                >  1:1059053‑M1/1‑150 (MQ=255)
           ccctttgcagcTCGAGGCGTTGGCACGTCTTGGGACTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGG                                                                                                                                           <  2:1109571‑M1/145‑1 (MQ=255)
           cccGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGG                                                                                                                                           >  2:306312‑M1/1‑150 (MQ=255)
           caggccgtcgaccagcgagaattcggagtggacgcgcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCggg                                                                                                                                           <  1:166674‑M1/12‑1 (MQ=255)
                     ctcGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCT                                                                                                                                 <  2:1937636‑M1/150‑1 (MQ=255)
                      tcGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTC                                                                                                                                <  1:596572‑M1/150‑1 (MQ=255)
                         tggCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTca                                                                                                                             >  2:1652429/2‑150 (MQ=255)
                              ttGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGa                                                                                                                        <  1:1967828/150‑1 (MQ=255)
                               tGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGAt                                                                                                                       <  1:1883765/150‑1 (MQ=255)
                                   aCGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAg                                                                                                                          <  1:843438/143‑1 (MQ=255)
                                   aCGTCTTGGGCCTACGCCAATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                                   <  2:127882/150‑1 (MQ=255)
                                        ttGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTc                                                                                                              >  2:837989/1‑150 (MQ=255)
                                              gcaggtgaacgaagggaaccgacatggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCGTGCccgcgaa                                                                                                                               <  1:1102877‑M1/24‑4 (MQ=255)
                                                  gCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGcggcgg                                                                                                    >  1:1584757/1‑150 (MQ=255)
                                                   cccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCggg                                                                                                   <  1:1652429/150‑1 (MQ=255)
                                                    ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                                   <  2:363478/133‑1 (MQ=255)
                                                    ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCAt                                                                                                                   >  1:363478/1‑133 (MQ=255)
                                                    ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                                  <  2:57590/150‑1 (MQ=255)
                                                    ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                                  >  2:180378/1‑150 (MQ=255)
                                                     cATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgat                                                                                                 >  2:51589‑M1/1‑119 (MQ=255)
                                                      aTTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGcc                                                                                                >  2:1377864/1‑150 (MQ=255)
                                                      aTTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTCACCTATTGGGGCCGCTTCTCGGCCCT‑TCGCGGGACCGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGcc                                                                                                >  1:772253/1‑150 (MQ=255)
                                                          aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTca                                                                                                                             >  1:1450820/1‑117 (MQ=255)
                                                          aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTca                                                                                                                             <  2:1450820/117‑1 (MQ=255)
                                                           tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTAcc                                                                                           >  1:493706/1‑150 (MQ=255)
                                                                gTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGGGCGAATGCGTCACCGCTTCCCTGTTCTGACGCCATGAGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      <  1:1621958/150‑1 (MQ=38)
                                                                gTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtga                                                                                      <  1:51589‑M1/150‑43 (MQ=255)
                                                                 ttCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt                                                                                                               >  1:654613/1‑124 (MQ=255)
                                                                 ttCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGt                                                                                                               <  2:654613/124‑1 (MQ=255)
                                                                     ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcg                                                                                 >  2:2399902‑M1/1‑103 (MQ=255)
                                                                     ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCACGAAGACGTCACCGAGTCCCTGATCTGCCCTATTGGGGCCGCTTC‑CAACAATGTTTCTTTCTCTCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGACGTGCCTGTGGGAGCg                                                                                 >  1:1151973/1‑150 (MQ=255)
                                                                      tggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCgg                                                                                >  2:728552‑M1/80‑150 (MQ=255)
                                                                       ggaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCggg                                                                               >  2:360351‑M1/79‑150 (MQ=255)
                                                                       cGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcggg                                                                               >  1:1527910‑M2/1‑143 (MQ=255)
                                                                        gaagatcctgtagcagtgcttaacgacaagggcgggattgtagcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGc                                                                              >  2:1882157‑M1/78‑150 (MQ=255)
                                                                        gCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggcg                                                                                                     >  1:214102/1‑127 (MQ=255)
                                                                        gCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggcg                                                                                                     <  2:214102/127‑1 (MQ=255)
                                                                          cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      <  2:1292919/140‑1 (MQ=255)
                                                                          cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      >  1:1292919/1‑140 (MQ=255)
                                                                          cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgt                                                                            <  1:246961‑M2/150‑11 (MQ=255)
                                                                           ccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCtctc                                                                                                                              >  1:1231322/1‑99 (MQ=255)
                                                                           ccGCTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCtctc                                                                                                                              <  2:1231322/99‑1 (MQ=255)
                                                                                gcgggcggCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgc                                                                      >  1:1377864‑M2/1‑134 (MQ=255)
                                                                                    gcggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaag                                                                  >  1:462209‑M2/1‑130 (MQ=255)
                                                                                        cTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCCGTCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggcc                                                              <  1:2097913‑M1/150‑67 (MQ=255)
                                                                                        cTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGcggcgg                                                                                                    <  2:2359537/112‑1 (MQ=255)
                                                                                        cTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGcggcgg                                                                                                    >  1:2359537/1‑112 (MQ=255)
                                                                                        cTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCt                                                              >  1:1907495/1‑150 (MQ=255)
                                                                                         ttGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgccc                                                                        <  2:401421‑M2/139‑15 (MQ=255)
                                                                                         ttGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgccc                                                                        >  1:401421‑M2/1‑125 (MQ=255)
                                                                                             gAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCaaa                                                         <  1:1221994/150‑1 (MQ=255)
                                                                                                 cgcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcag                                                     <  1:306312/150‑1 (MQ=255)
                                                                                                  gcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcagc                                                    >  1:994113/1‑150 (MQ=255)
                                                                                                  gcgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcagc                                                    <  1:311263/150‑1 (MQ=255)
                                                                                                   cgcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGcc                                                   <  2:740180/150‑1 (MQ=255)
                                                                                                    gcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCTGGTACGCCCGCTATCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGccc                                                  <  2:933320/150‑1 (MQ=255)
                                                                                                    gcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                             <  1:1944442/91‑1 (MQ=255)
                                                                                                    gcgAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCt                                                                                                             >  2:1944442/1‑91 (MQ=255)
                                                                                                      gAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagag                                                                                   <  2:1404354‑M1/115‑46 (MQ=255)
                                                                                                            gTCACCGATTCCCTGATCTGACCTATTGGGGCTGCTTTGCAGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggt                                          <  1:221063‑M1/150‑87 (MQ=255)
                                                                                                             tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTg                                                             >  2:1569721/1‑130 (MQ=255)
                                                                                                              cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      <  1:1480284/104‑1 (MQ=255)
                                                                                                              cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      >  2:1480303/1‑104 (MQ=255)
                                                                                                              cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGACCCAAAAAAAGc                                        <  2:1151973/150‑1 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                   >  1:667886‑M2/1‑103 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                   <  2:667886‑M2/122‑20 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                          <  1:879471/147‑1 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                          >  2:879471/1‑147 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAccc                                       >  2:1040882/1‑150 (MQ=255)
                                                                                                               aCCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcc                                       >  1:1516614/1‑150 (MQ=255)
                                                                                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggc                                                                                                      >  1:1541360/1‑86 (MQ=255)
                                                                                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggc                                                                                                      <  2:1541360/86‑1 (MQ=255)
                                                                                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                   >  1:752609‑M2/1‑102 (MQ=255)
                                                                                                                ccGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaa                                                                   <  2:752609‑M2/121‑20 (MQ=255)
                                                                                                                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagc                                                                                  >  2:1641834‑M1/1‑59 (MQ=255)
                                                                                                                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagc                                                                                  <  1:1641834‑M1/105‑47 (MQ=255)
                                                                                                                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGcccc                                     >  2:501430/1‑150 (MQ=255)
                                                                                                                 cGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGACTCATCGATCTGATCGGCGGGGCCGTACCTGTGCGAGCACGCGTTCCAGCTAAGGGCTGCAAAGGACCCCCAAAAAAAGcccc                                     >  2:1067701/1‑150 (MQ=37)
                                                                                                                 agcctaactaggggctttttttggggctgctttgcaGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTgg                                                                                      <  2:228850‑M1/65‑1 (MQ=255)
                                                                                                                   aTTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTa                                   <  1:742218/150‑1 (MQ=255)
                                                                                                                   aTTCCCTGACCTGACCTATTGGCGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGTATTAGTCGGTCTGAGCGGTGGGGCCGTACCTGTGGGAGCTGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTa                                   <  2:1208656/150‑1 (MQ=38)
                                                                                                                      cccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGtt                                >  1:2270152/1‑150 (MQ=255)
                                                                                                                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                      <  2:534565/127‑1 (MQ=255)
                                                                                                                       ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                      >  1:534565/1‑127 (MQ=255)
                                                                                                                          gATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGc                            >  1:1804840/1‑150 (MQ=255)
                                                                                                                              tGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggc                                                               <  2:1075838‑M2/111‑24 (MQ=255)
                                                                                                                              tGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggc                                                               >  1:1075838‑M2/1‑88 (MQ=255)
                                                                                                                                  cTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgt                                                                            <  2:454228‑M2/94‑11 (MQ=255)
                                                                                                                                   tATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCAGGCCCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATccc                   <  1:738885/150‑1 (MQ=255)
                                                                                                                                     gctattccGCTTCGCGCCCCT‑TCGAGGGCCCGACAGCTCTATCGGGATTGACGGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGACACAAAAAAAGCCCCTAGTTAGGCTACAATCCCGc                 <  2:1600823/144‑1 (MQ=25)
                                                                                                                                          gCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTg                                                             >  2:850807/1‑101 (MQ=255)
                                                                                                                                          gCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTg            >  1:1026924/1‑150 (MQ=255)
                                                                                                                                           ccGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGt           >  2:1821260/1‑150 (MQ=255)
                                                                                                                                                 cgcgGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTaa     >  1:2022904/1‑150 (MQ=255)
                                                                                                                                                   cgGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGc   >  1:1938164/1‑150 (MQ=255)
                                                                                                                                                    ggCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCa  <  2:2270152/150‑1 (MQ=255)
                                                                                                                                                     gCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagg                                                                 >  1:1557760‑M2/1‑65 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GGCTACCCGACCCCGGTGCATCTCGAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCT‑TCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCA  >  NC_002947/1799744‑1800041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.