| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1932621 = | 100 (1.130) | 10 (0.150) | 9/190 | NT | 13.6% | intergenic (‑46/+105) | rluA/minE | bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor |
| ? | NC_002947 | 1932693 = | 50 (0.730) | intergenic (‑118/+33) | rluA/minE | bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor | |||||
GCATATCGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1932795‑1932621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggcttgcccgcgaagggcTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCACTTCCAGCA > NC_002947/1932693‑1932841 GCATATCGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGT < 1:1426720/150‑1 CATATCGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTAGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTA < 1:170907/150‑1 CGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTTCTACAGGGGACGCATATCCTTTGTAGGAGC < 1:1768436/150‑1 CGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGC < 2:836119/150‑1 GAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCG < 1:727725/150‑1 AGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGG < 2:832750/150‑1 GCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGG < 1:745602/150‑1 GCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGAAATTTTGGGGCTGCTTTAAAGCCCTTTGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGG < 1:2100560/150‑1 ACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCG > 1:236332/1‑150 CAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCG > 1:1981624/1‑150 CAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCCTCGGGGGCAAGCCCGCTCCTTCAGGGGACGCATACCCCTTGTAGGAGCGGGCTTGCCCGCc > 2:115091/1‑149 AGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGA > 1:1031411/1‑150 GCACCTGCTGTATTCTGGAGCTGAACATCCCCCTGCCGGATTGCTGATACGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGCCGCATATCCTTTGTAGGAGCGGGCTGGCCCGCGAAGG < 2:1769223/150‑1 GGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGG > 2:2042312/1‑99 GGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGG < 1:2042312/99‑1 ACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTT > 2:1114407/1‑66 ACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTT < 1:1114407/66‑1 CCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCA < 2:469520/130‑1 CCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCA > 1:469520/1‑130 CCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAAGCGGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCT > 2:776495/1‑150 GCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAAGCGGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCG > 2:58282/1‑150 TCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCCGCAAAGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGAT > 2:970395/1‑150 TACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCTAGGCAGCCCCAAATTGTCGACTACGCGGATCAG > 1:483273/1‑85 TACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCTAGGCAGCCCCAAATTGTCGACTACGCGGATCAG < 2:483273/85‑1 ACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGC > 2:1784879/1‑150 GGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACAT > 2:2014773/1‑150 TATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTG > 2:2243269/1‑150 TAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTC > 1:869962/1‑150 GAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACA < 1:1359615/150‑1 GCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATA > 1:110244/1‑150 CGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATAT < 1:832750/150‑1 GGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGA < 1:2220542/71‑1 GGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGA > 2:2220542/1‑71 GCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTG > 1:1487301/1‑150 GCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTG < 2:1919691/150‑1 CTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGC < 2:1487301/150‑1 tctCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCG < 1:1120441/147‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCG < 1:2243269/150‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCG < 1:1241837/150‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGT < 2:528778/128‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGT > 1:528778/1‑128 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATC > 2:1399281/1‑126 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATC < 1:1399281/126‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGT < 1:1445404/36‑1 TTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGT > 2:1445404/1‑36 CCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGAT < 2:170907/150‑1 CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGGACATGATCGATGCCGATGGTCACATATTTGTGGATC > 2:1048555/1‑150 CCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATC < 1:1784879/150‑1 CGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCA < 1:2055413/150‑1 CGCGAAGGGCTGAAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCA < 2:2266789/150‑1 GCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCAC > 1:249840/1‑150 AAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCACTTC < 1:1137090/150‑1 CTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTGGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCACTTCCAGCA < 1:783580/150‑1 CTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGGTCACATATTTGCGGATCACTTCCAGCA > 1:1705469/1‑150 GCATATCGAGCTGGAAAACCAGGGCAGCTGCTCGATTCTGGAGCTGAACATCACCCTGCCGGATCGCTGATCCGCGTAGTCGACAATTTGGGGCTGCCTTGCAGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1932795‑1932621‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtaggagcgggcttgcccgcgaagggcTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCCAGAATCGAGCAGCTGCCCTGGTTTTCCAGCTCGATATGCACATCATCGTTGCCGATGTTCACATATTTGCGGATCACTTCCAGCA > NC_002947/1932693‑1932841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |