New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1932621 =100 (1.130)10 (0.150) 9/190 NT 13.6% intergenic (‑46/+105) rluA/minE bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor
?NC_002947 1932693 = 50 (0.730)intergenic (‑118/+33) rluA/minE bifunctional tRNA pseudouridine(32) synthase TrmQ/ribosomal large subunit pseudouridine synthase RluA/cell division topological specificity factor

Only 100 of 153 total aligned reads displayed.

TTGTTGTCCTCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCC  >  NC_002947/1932472‑1932756
                                                                                                                                                     |                                                                                                                                       
tgctggaagtgatccgcaaatatgtgaccatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcag                                                                                                                                         >  1:1705469‑M1/150‑150 (MQ=255)
     gaagtgatccgcaaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCtt                                                                                                                                    <  1:1137090‑M1/6‑1 (MQ=255)
      tCCTCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTc                                                                                                                                   >  2:230221/1‑150 (MQ=255)
      tCCTCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCCGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTc                                                                                                                                   >  2:368845/1‑150 (MQ=255)
        gtgatccgcaaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTcgc                                                                                                                                 >  1:249840‑M1/142‑150 (MQ=255)
         tgatccgcaaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTcgcg                                                                                                                                <  1:2055413‑M1/10‑1 (MQ=255)
         tctgCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTcgcg                                                                                                                                <  1:1399696/147‑1 (MQ=255)
         tCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTcgcg                                                                                                                                >  2:242329/1‑150 (MQ=255)
         tCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTcgcg                                                                                                                                >  1:957987/1‑150 (MQ=255)
         tCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTcgcg                                                                                                                                >  2:1481741/1‑150 (MQ=255)
          ctggaCGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCgg                                                                                                                               <  1:95143/146‑1 (MQ=255)
           atccgcaaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCggg                                                                                                                              <  2:170907‑M1/12‑1 (MQ=255)
              cgcaaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCaa                                                                                                                           <  1:2243269‑M1/15‑1 (MQ=255)
                gtccAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCGGCAGGATGGTGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGTATTGCAGGTCTCACGAAAATAGCAGTAAGCGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGc                                                                                                                         <  2:2219251/148‑1 (MQ=255)
                caaatatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGc                                                                                                                         >  1:1487301‑M1/134‑150 (MQ=255)
                  ccAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGccc                                                                                                                       >  2:1981624/1‑150 (MQ=255)
                   atatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCg                                                                                                                      <  1:832750‑M1/20‑1 (MQ=255)
                    tatgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGc                                                                                                                     >  1:110244‑M1/130‑150 (MQ=255)
                      tgtgaacatcggcaacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGCTc                                                                                                                   <  1:1359615‑M1/23‑1 (MQ=255)
                      ggaCCGACAGCAGCAGGGTCGGTTGGTTGATCACCAGGAGGGCGGCGTCTTCGAGGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTc                                                                                                                   <  2:901784/148‑1 (MQ=255)
                       tACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTcc                                                                                                                  >  1:1755359/1‑150 (MQ=255)
                          cGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCGTTGCGGCCCTTCGCGGGGCAGCACGCTcggcg                                                                                                               >  2:2202011/1‑146 (MQ=255)
                           gACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCCCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCgg                                                                                                                                         >  1:883392/1‑123 (MQ=255)
                           gACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGAGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCCCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCgg                                                                                                                                         <  2:883392/123‑1 (MQ=255)
                                cagcagGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGa                                                                                                         <  2:630246/150‑1 (MQ=255)
                                  caacgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGata                                                                                                       >  2:2243269‑M1/116‑150 (MQ=255)
                                   cagGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGatat                                                                                                      <  1:1792132/150‑1 (MQ=255)
                                    acgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCaa                                                                                                                           <  2:528778‑M1/15‑1 (MQ=255)
                                    acgatgatgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCaa                                                                                                                           >  1:528778‑M1/114‑128 (MQ=255)
                                       gTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGt                                                                                                  >  2:1646895/1‑150 (MQ=255)
                                        tCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTc                                                                                                 >  2:1031411/1‑150 (MQ=255)
                                          atgtgcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTccc                                                                                               >  2:2014773‑M1/108‑150 (MQ=255)
                                           gTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTcccc                                                                                              <  2:331153/150‑1 (MQ=255)
                                              gcatatcgagctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGt                                                                                           >  2:1784879‑M1/104‑150 (MQ=255)
                                                ttgATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         >  2:1187339/1‑150 (MQ=255)
                                                ttgATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         <  1:386338/150‑1 (MQ=255)
                                                  gATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGa                                                                                       >  1:918874/1‑150 (MQ=255)
                                                   aTCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGGTTCTGCAAGTGTTGTGCGTCCCCTGTAggcg                                                                                      >  2:126171/1‑148 (MQ=255)
                                                    tCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCgg                                                                                                                               <  1:2171652/108‑1 (MQ=255)
                                                    tCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCgg                                                                                                                               >  2:2171652/1‑108 (MQ=255)
                                                    tCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGc                                                                                     <  2:190351/150‑1 (MQ=255)
                                                      agctggaaaaccagggcagctgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggccgctttgcgGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCgg                                                                                   >  2:776495‑M1/96‑150 (MQ=255)
                                                      aCCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCgg                                                                                   <  1:324689/150‑1 (MQ=255)
                                                        cAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAg                                                                                                           <  1:480715/124‑1 (MQ=255)
                                                        cAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAg                                                                                                           >  2:480715/1‑124 (MQ=255)
                                                        cAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         >  2:2139425/1‑142 (MQ=255)
                                                        cAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         <  1:2139425/142‑1 (MQ=255)
                                                          ggATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTa                                                                                                                <  2:1413473/117‑1 (MQ=255)
                                                          ggATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCtt                                                                               <  1:1313097/150‑1 (MQ=255)
                                                           gATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTg                                                                              <  1:774009/150‑1 (MQ=255)
                                                           gATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTg                                                                              >  2:774009/1‑150 (MQ=255)
                                                                cggcgTCGTCGAACAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACCAAGGATATGCGTCCCCTGTAGGAGCGGGCTTCCCcgc                                                                         <  2:598779/150‑1 (MQ=255)
                                                                   cgTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGaa                                                                      <  2:1617251/150‑1 (MQ=255)
                                                                    gTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTa                                                                                          <  1:1858583/129‑1 (MQ=255)
                                                                       ttCGAAGAGGATCTGGACATTCGACATCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACaaa                                                                                                            <  1:1514473/108‑1 (MQ=255)
                                                                       ttCGAAGAGGATCTGGACATTCGACATCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACaaa                                                                                                            >  2:1514473/1‑108 (MQ=255)
                                                                       ttCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAGGGGACGCATATCCTTTGTAGGAGCGGGCTTGCCCGCGAAGGGc                                                                  <  2:542356/150‑1 (MQ=18)
                                                                       ttCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGc                                                                  >  1:1241854/1‑150 (MQ=255)
                                                                          tgctcgattctggagctgaacatcaccctgccggatcgctgatccgcgtagtcgacaatttggggctgccttgcaGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCgg                                                                                   >  1:469520‑M1/76‑130 (MQ=255)
                                                                          gAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGc                                                               >  1:849707/1‑150 (MQ=255)
                                                                             gagGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAg                                                            <  1:230221/150‑1 (MQ=255)
                                                                                gATCCGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCa                                                         <  1:368845/150‑1 (MQ=255)
                                                                                          ttCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAAtt                                               <  2:957987/150‑1 (MQ=255)
                                                                                             gACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCAGCGAAGGGCTGCACGGCAGCCCCCAATTGTc                                            <  2:1241854/150‑1 (MQ=255)
                                                                                               cAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGa                                          <  1:504223/150‑1 (MQ=255)
                                                                                                  cGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTGCAAAGGATATGCGTTCCCTGTAGGAGCGGGCTTGTCCGCGAAGGGCTGCATGGCAGCCCCATATTGTCGCCtg                                       >  2:2055413/1‑149 (MQ=37)
                                                                                                     taTTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTAcgc                                    <  1:33154/149‑1 (MQ=255)
                                                                                                     cATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTAcgc                                    <  1:1060178/150‑1 (MQ=255)
                                                                                                       ttGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCgg                                  >  2:1137090/1‑150 (MQ=255)
                                                                                                         gCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGAt                                <  1:1187339/150‑1 (MQ=255)
                                                                                                           aGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAgg                                                           <  1:765878/121‑1 (MQ=255)
                                                                                                             gTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGa                                 <  2:1456872/145‑1 (MQ=255)
                                                                                                             gTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGa                                 >  1:1456872/1‑145 (MQ=255)
                                                                                                                ctgatccgcgtagtcgacaatttggggctgcctagcaGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTa                                                                                          <  2:483273‑M1/48‑1 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCaaa                                                 >  2:1405625/1‑124 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCaaa                                                 <  1:1405625/124‑1 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTc                                            >  1:398220/1‑129 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTc                                            <  2:398220/129‑1 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTAcgc                                    >  2:939563/1‑137 (MQ=255)
                                                                                                                  aCGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATcc                       <  2:969061/150‑1 (MQ=255)
                                                                                                                    gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCaa                                                  <  1:318263/121‑1 (MQ=255)
                                                                                                                    gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCaa                                                  >  2:318263/1‑121 (MQ=255)
                                                                                                                    gAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCgg                     <  2:1967853/150‑1 (MQ=255)
                                                                                                                       aaTAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAg                  <  1:1646895/150‑1 (MQ=255)
                                                                                                                              gTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         <  2:2316989/72‑1 (MQ=255)
                                                                                                                              gTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAg                                                                                         >  1:2316989/1‑72 (MQ=255)
                                                                                                                              gTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATg           >  2:1359615/1‑150 (MQ=255)
                                                                                                                                acaatttggggctgccttgcaGCCCTTCGCGGGCaa                                                                                                                           <  1:1445404‑M1/15‑1 (MQ=255)
                                                                                                                                 ccgcgaaGGGCCGCAAAGCGGCCCTCCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCgg                                                                                   <  2:419726‑M1/68‑1 (MQ=255)
                                                                                                                                 ccgcgaaGGGCCGCAAAGCGGCCCTCCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCgg                                                                                   >  1:419726‑M1/8‑75 (MQ=255)
                                                                                                                                    gCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCa                   <  1:1988323/136‑1 (MQ=255)
                                                                                                                                      aaGGGCCGCAAAGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGatat                                                                                                      >  2:2222570‑M1/3‑51 (MQ=255)
                                                                                                                                      aaGGGCCGCAAAGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGatat                                                                                                      <  1:2222570‑M1/49‑1 (MQ=255)
                                                                                                                                          GCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGgctgccttg                                                           <  1:1630705‑M1/90‑5 (MQ=255)
                                                                                                                                           CCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCa                                                         >  1:1359951‑M1/1‑91 (MQ=255)
                                                                                                                                           CCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCa                                                         <  2:1359951‑M1/91‑1 (MQ=255)
                                                                                                                                             GCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTc                                            <  1:289026‑M1/102‑1 (MQ=255)
                                                                                                                                             GCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTc                                            >  2:289026‑M1/1‑102 (MQ=255)
                                                                                                                                               tttGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGt                                                                                           <  1:1658254/53‑1 (MQ=255)
                                                                                                                                               tttGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGt                                                                                           >  2:1658254/1‑53 (MQ=255)
                                                                                                                                                     |                                                                                                                                       
TTGTTGTCCTCGGCACGGCCAGGTACCGACAGCAGCAGGGTCGGTTTGTTGATCACCAGGATGGCGGCGTCTTCGAAGAGGATCTGGACATTCGACAGCGGCATTGCAGGTCTCACGAAAATAGCAGTAAACGCTGGGGCCGCTTTGCGGCCCTTCGCGGGCAAGCCCGCTCCTACAAAGGATATGCGTCCCCTGTAGGAGCGGGCTTGCCCGCGAAGGGCTGCAAGGCAGCCCCAAATTGTCGACTACGCGGATCAGCGATCCGGCAGGGTGATGTTCAGCTCC  >  NC_002947/1932472‑1932756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.