New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 223673575 (0.850)7 (0.080) 5/236 NT 8.5% coding (1803/2016 nt) uvrB uvrABC excinuclease protein B
?NC_002947 = 2236758 78 (0.920)coding (1826/2016 nt) uvrB uvrABC excinuclease protein B

ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2236584‑2236735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG  <  NC_002947/2236758‑2236610
                                                                                                                                                                                                                                                                                                             
ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGC                                                                                                                                                         >  1:2024801/1‑150
                                   ATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCTACCGCTTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG                                                                                                                      <  1:1250188/150‑1
                                                                         CTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG                                                                                                                      >  1:1205329/1‑112
                                                                         CTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG                                                                                                                      <  2:1205329/112‑1
                                                                          TTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACG                                                                                                                         >  1:195804/1‑108
                                                                          TTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACG                                                                                                                         <  2:195804/108‑1
                                                                                     CAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG                                                                                                                      <  1:42670/100‑1
                                                                                     CAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG                                                                                                                      >  2:42670/1‑100
                                                                                                                                                    GCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCAGCTTCCCTCATGCCGGTGATGTACTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCG     >  1:46630/1‑150
                                                                                                                                                     CCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGC    <  1:923329/150‑1
                                                                                                                                                      CCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTC                 <  2:1693435/136‑1
                                                                                                                                                      CCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGANGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTC                 >  1:1693435/1‑136
                                                                                                                                                      CCTTGCGCTTCTTGCTGCGCGCACCCGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGC                                               <  1:2087522/106‑1
                                                                                                                                                      CCTTGCGCTTCTTGCTGCGCGCACCCGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGC                                               >  2:2087522/1‑106
                                                                                                                                                       CTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAGGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG  >  2:1614099/1‑150
                                                                                                                                                                                                                                                                                                             
ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2236584‑2236735
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG  <  NC_002947/2236758‑2236610

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.