New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2236735 | 75 (0.850) | 7 (0.080) | 5/236 | NT | 8.5% | coding (1803/2016 nt) | uvrB | uvrABC excinuclease protein B |
? | NC_002947 | = 2236758 | 78 (0.920) | coding (1826/2016 nt) | uvrB | uvrABC excinuclease protein B |
ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2236584‑2236735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG < NC_002947/2236758‑2236610 ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGC > 1:2024801/1‑150 ATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCTACCGCTTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG < 1:1250188/150‑1 CTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG > 1:1205329/1‑112 CTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG < 2:1205329/112‑1 TTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACG > 1:195804/1‑108 TTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACG < 2:195804/108‑1 CAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG < 1:42670/100‑1 CAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTG > 2:42670/1‑100 GCCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCAGCTTCCCTCATGCCGGTGATGTACTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCG > 1:46630/1‑150 CCCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGC < 1:923329/150‑1 CCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTC < 2:1693435/136‑1 CCTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGANGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTC > 1:1693435/1‑136 CCTTGCGCTTCTTGCTGCGCGCACCCGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGC < 1:2087522/106‑1 CCTTGCGCTTCTTGCTGCGCGCACCCGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGC > 2:2087522/1‑106 CTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAGGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG > 2:1614099/1‑150 ACGCCGATAACGTAACAGGCTCCATGCAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2236584‑2236735 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcccTTGCGCTTCTTGCTGCGCGCACCGGGCACGGTGGCACCTTCCATGATGTCGGTGATGTCCTTGACCACGCCCTTGGGCACGATGCCGTTGGCTTCGTTGAAGGCGATCTGCTTCTCGCGGCGGCGCTCGGTTTCGTCGATGGCTCGCTG < NC_002947/2236758‑2236610 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |