New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 223673575 (0.850)7 (0.080) 5/236 NT 8.5% coding (1803/2016 nt) uvrB uvrABC excinuclease protein B
?NC_002947 = 2236758 78 (0.920)coding (1826/2016 nt) uvrB uvrABC excinuclease protein B

CAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGC  >  NC_002947/2236610‑2236898
                                                                                                                                                    |                                                                                                                                             
cAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCCTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAg                                                                                                                                              >  2:1614099‑M2/1‑149 (MQ=255)
  gCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAggg                                                                                                                                            <  1:923329‑M2/150‑4 (MQ=255)
   cGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGTACATCACCGGCATGAGGGAAGCTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggc                                                                                                                                           >  1:46630‑M2/1‑146 (MQ=255)
      gCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATg                                                                                                                                        <  2:709890/150‑1 (MQ=255)
            gacgaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAg                                                                                                                                  >  2:648822/1‑150 (MQ=255)
             acgaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAgg                                                                                                                                 >  2:1352378/1‑150 (MQ=255)
             acgaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAgg                                                                                                                                 >  1:1776528/1‑150 (MQ=255)
              cgaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAggc                                                                                                                                <  2:2002333/150‑1 (MQ=255)
               gaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACNTCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgg                                                                                                                                             >  1:1693435‑M2/1‑134 (MQ=255)
               gaAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgg                                                                                                                                             <  2:1693435‑M2/136‑3 (MQ=255)
                    cGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCgga                                                                                                                          <  1:752831/150‑1 (MQ=255)
                    cGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCgga                                                                                                                          <  2:1825193/150‑1 (MQ=255)
                     gAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCggag                                                                                                                         <  1:1352378/150‑1 (MQ=255)
                       gcgcCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCggagga                                                                                                                       <  2:570974/150‑1 (MQ=255)
                        cgccgccgcGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGgaggag                                                                                                                      <  2:1528755/150‑1 (MQ=255)
                         gccgccgcGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCggaggtct                                                                                                                     <  1:1290274/150‑4 (MQ=255)
                            gccgcGAGAAGCAGATCGCCTTCAACGCGCCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAgcg                                                                                                                  >  1:1872274/1‑150 (MQ=255)
                               gcgAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGccc                                                                                                               >  1:2367531/1‑150 (MQ=255)
                                    aaGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTAc                                                                                                          <  2:2352986/150‑1 (MQ=255)
                                    aaGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTAc                                                                                                          >  1:793514/1‑150 (MQ=255)
                                      gCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGa                                                                                                        <  1:699791/150‑1 (MQ=255)
                                      gCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGa                                                                                                        >  2:1704365/1‑150 (MQ=255)
                                          aTCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGc                                                                                                     >  1:2369572/1‑149 (MQ=255)
                                          aTCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGc                                                                                                     <  2:2369572/149‑1 (MQ=255)
                                             gCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCCAGGTCGTTGGCCACAGCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGaa                                                                                                 <  2:1872274/150‑1 (MQ=255)
                                             gCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCGGGTGCGCGCAGCAAGAAGCGCAAgg                                                                                                                                             >  2:2087522‑M2/1‑104 (MQ=255)
                                             gCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCGGGTGCGCGCAGCAAGAAGCGCAAgg                                                                                                                                             <  1:2087522‑M2/106‑3 (MQ=255)
                                               cTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACt                                                                                               >  2:698395/1‑150 (MQ=255)
                                                ttCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTg                                                                                              >  2:2104982/1‑150 (MQ=255)
                                                ttCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTg                                                                                              >  1:586074/1‑150 (MQ=255)
                                                 tCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGc                                                                                             <  2:923329/150‑1 (MQ=255)
                                                    aCGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTa                                                                                          >  2:2263352/1‑150 (MQ=255)
                                                           cAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGGGAGCGCCCGTCACGAGGCCGAACTGc                                                                                             <  1:61297/140‑1 (MQ=255)
                                                           cAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGGGAGCGCCCGTCACGAGGCCGAACTGc                                                                                             >  2:61297/1‑140 (MQ=255)
                                                           cAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCggg                                                                                  >  2:682619/1‑150 (MQ=255)
                                                            aaCGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAgc                                                                                                                   <  1:2286416/117‑1 (MQ=255)
                                                            aaCGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAgc                                                                                                                   >  2:2286416/1‑117 (MQ=255)
                                                            aaCGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGc                                                                                 >  2:452355/1‑150 (MQ=255)
                                                              cGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCga                                                                               <  1:1704365/150‑1 (MQ=255)
                                                               ggCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCgag                                                                              >  2:1860556/1‑150 (MQ=255)
                                                               ggCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCgag                                                                              <  2:1907030/150‑1 (MQ=255)
                                                                gCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCgaga                                                                             <  2:432524/150‑1 (MQ=255)
                                                                  aTCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATc                                                                           <  2:127164/150‑1 (MQ=255)
                                                                     gTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCAcc                                                                        >  2:2380599/1‑150 (MQ=255)
                                                                     gTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCAcc                                                                        <  2:2140379/150‑1 (MQ=255)
                                                                     gTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGACACCGTACGCGGTGCGCGCAGAAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCAcc                                                                        >  1:1500365/1‑150 (MQ=255)
                                                                       gCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCaa                                                                      <  2:793514/150‑1 (MQ=255)
                                                                         ccAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAgc                                                                    <  1:2263352/150‑1 (MQ=255)
                                                                          cAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCgga                                                                                                                          >  2:1364402/1‑96 (MQ=255)
                                                                          cAAGGGCGTGGTCAAGGACAACACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCgga                                                                                                                          <  1:1364402/96‑1 (MQ=255)
                                                                               gCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCa                                                              >  1:1247219/1‑150 (MQ=255)
                                                                                cGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCaa                                                             <  2:2367531/150‑1 (MQ=255)
                                                                                cGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCaa                                                             <  1:698395/150‑1 (MQ=255)
                                                                                     tCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGt                                                        >  1:683045/1‑150 (MQ=255)
                                                                                      cAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGtt                                                       <  2:1653327/150‑1 (MQ=255)
                                                                                       aaGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTg                                                      >  2:1534942/1‑150 (MQ=255)
                                                                                         ggACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGa                                                    <  2:1959816/150‑1 (MQ=255)
                                                                                         ggACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGa                                                    >  2:810710/1‑150 (MQ=255)
                                                                                              tCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAgaga                                               >  2:48574/1‑150 (MQ=255)
                                                                                                 ccGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGaaaa                                            <  2:1500365/150‑1 (MQ=255)
                                                                                                  cGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAat                                           <  1:648822/150‑1 (MQ=255)
                                                                                                    aCATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAatga                                         <  1:682619/150‑1 (MQ=255)
                                                                                                        catGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCa                                     <  1:2380599/150‑1 (MQ=255)
                                                                                                         atGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAATGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAg                                    >  1:131251/1‑150 (MQ=255)
                                                                                                         atGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGAAGCAGGTGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAg                                    >  1:1353228/1‑150 (MQ=255)
                                                                                                         agggAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCGGGGCGAGAGCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAg                                    >  2:1546887/3‑150 (MQ=255)
                                                                                                          tGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCggag                                                                                                                         <  1:1113591/65‑1 (MQ=255)
                                                                                                          tGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCggag                                                                                                                         >  2:1113591/1‑65 (MQ=255)
                                                                                                          tGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGaaaa                                            <  2:542856/141‑1 (MQ=255)
                                                                                                          tGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGaaaa                                            >  1:542856/1‑141 (MQ=255)
                                                                                                          tGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGt                                   >  2:609497/1‑150 (MQ=255)
                                                                                                           ggAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGtt                                  >  1:1746978/1‑150 (MQ=255)
                                                                                                            gAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATc                                                               >  1:1264581/1‑120 (MQ=255)
                                                                                                            gAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATc                                                               <  2:1264581/120‑1 (MQ=255)
                                                                                                                   ccAGCGTTCCCGGTGCGCGCAGCATGAAACGCAAGTGCATGGCCAAGGCGGCGGAGGAGTACGCCCGTTATTATGCCGAACTTCGTACGTCGGGCGAGATCATCAACCGCATCCAGCAGTTAGAAGAGAAAGTGATGCAGTTCTCAcgcg                          >  2:1100105/1‑150 (MQ=255)
                                                                                                                    cACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttggcttcgttgaag                                                                >  1:1205329‑M2/1‑33 (MQ=255)
                                                                                                                    cACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttggcttcgttgaag                                                                <  2:1205329‑M2/112‑80 (MQ=255)
                                                                                                                    cACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttg                                                                            >  2:42670‑M2/1‑33 (MQ=255)
                                                                                                                    cACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttg                                                                            <  1:42670‑M2/100‑68 (MQ=255)
                                                                                                                    cACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccaagcggtagggcacgatgccgttggcttcgttgaaggcgatctgcttctcgcggcggcgctcggtttcgtcgat                          <  1:1250188‑M2/150‑118 (MQ=255)
                                                                                                                     aCCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCAGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGAc                        >  2:1172893/1‑150 (MQ=255)
                                                                                                                       cGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttggcttcgttgaa                                                                 >  1:195804‑M2/1‑30 (MQ=255)
                                                                                                                       cGTGCCCGGTGCGCGCAGCAAGAAGCGCAAgggcacggtggcaccttccatgatgtcggtgatgtccttgaccacgcccttgggcacgatgccgttggcttcgttgaa                                                                 <  2:195804‑M2/108‑79 (MQ=255)
                                                                                                                        gTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTg                     <  1:48574/150‑1 (MQ=255)
                                                                                                                            ccGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGt                 >  2:815877/1‑150 (MQ=255)
                                                                                                                            ccGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGt                 >  2:1274249/1‑150 (MQ=255)
                                                                                                                              ggTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTc               >  2:1225101/1‑150 (MQ=255)
                                                                                                                                tGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGa             <  2:683045/150‑1 (MQ=255)
                                                                                                                                 gcgcgcAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGaa            <  1:380840/150‑1 (MQ=255)
                                                                                                                                      cagcaAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTgc       <  1:1172893/150‑1 (MQ=255)
                                                                                                                                           agaagCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGtt                                                       <  2:792651/97‑1 (MQ=255)
                                                                                                                                           agaagCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGtt                                                       >  1:792651/1‑97 (MQ=255)
                                                                                                                                           agaagCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGgcgc  >  2:1332342/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                             
CAGCGAGCCATCGACGAAACCGAGCGCCGCCGCGAGAAGCAGATCGCCTTCAACGAAGCCAACGGCATCGTGCCCAAGGGCGTGGTCAAGGACATCACCGACATCATGGAAGGTGCCACCGTGCCCGGTGCGCGCAGCAAGAAGCGCAAGGGCATGGCCAAGGCGGCGGAGGAGAGCGCCCGTTACGAGGCCGAACTGCGTACGCCGGGCGAGATCACCAAGCGCATCAAGCAGTTGGAAGAGAAAATGATGCAGTTCGCCCGCGACCTGGAGTTCGAAGCTGCGGCGC  >  NC_002947/2236610‑2236898

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.