| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2347864 | 78 (0.880) | 4 (0.050) | 4/236 | NT | 5.2% | coding (28/3084 nt) | PP_2065 | multidrug RND transporter |
| ? | NC_002947 | = 2347874 | 71 (0.840) | coding (38/3084 nt) | PP_2065 | multidrug RND transporter | |||||
ACCTCCGGCCTGACGCCCGGTGACCGTGTGGTGGTTTCCGGCCAGCTGAAACTGAGTGATGGCATGCCGGTCGAGCCCGTGGCGCAGGACAGCCTGCAGGCCAGCCAGGGAGGGCGGCAGTCGTGAGGTTTACCGACGTCTTCGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2347715‑2347864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccAGCACCGG‑GC‑GGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTCCTGCGCCACGGGCTCGACCGGCATGCCATCACTCAGTTTCAGCTGGCCGGAAACCACCACACGGTCACCGGGC < NC_002947/2347874‑2347729 ACCTCCGGCCTGACGCCCGGTGACCGTGTGGTGGTTTCCGGCCAGCTGAAACTGAGTGATGGCATGCCGGTCGAGCCCGTGGCGCAGGACAGCCTGCAGGCCAGCCAGGGAGGGCGGCAGTCGTGAGGTTTACCGACGTCTTCGTGCGCC > 1:309144/1‑150 GCAGGACAGCCTGCAGGCCAGCCAGGGAGGGCGGCAGTCGTGAGGTTTACCGACGTCTTCGTGCGCCAGCACCGG‑GC‑GGCGCACGAA < 1:221268/87‑1 GCAGGACAGCCTGCAGGCCAGCCAGGGAGGGCGGCAGTCGTGAGGTTTACCGACGTCTTCGTGCGCCAGCACCGG‑GC‑GGCGCACGAA > 2:221268/1‑87 ACGTCTTCGTGCGCC‑GC‑CCGGTGCTGGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTC < 1:1765481/88‑1 ACGTCTTCGTGCGCC‑GC‑CCGGTGCTGGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTC > 2:1765481/1‑88 CGCCAGCACCGG‑GC‑GGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTCCTGCGCCACGGGCTCGACCGGCATGCCATCACTCAGTTTCAGCTGGCCGGAAACCACCACACGGTCACCGGGC < 2:826767/150‑1 CCAGCACCGG‑GC‑GGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTCCTGCGCCACGGGCTCGACCGGCATGCCATCACTCA < 1:1970707/110‑1 CCAGCACCGG‑GC‑GGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTCCTGCGCCACGGGCTCGACCGGCATGCCATCACTCA > 2:1970707/1‑110 ACCTCCGGCCTGACGCCCGGTGACCGTGTGGTGGTTTCCGGCCAGCTGAAACTGAGTGATGGCATGCCGGTCGAGCCCGTGGCGCAGGACAGCCTGCAGGCCAGCCAGGGAGGGCGGCAGTCGTGAGGTTTACCGACGTCTTCGTGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2347715‑2347864‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccAGCACCGG‑GC‑GGCGCACGAAGACGTCGGTAAACCTCACGACTGCCGCCCTCCCTGGCTGGCCTGCAGGCTGTCCTGCGCCACGGGCTCGACCGGCATGCCATCACTCAGTTTCAGCTGGCCGGAAACCACCACACGGTCACCGGGC < NC_002947/2347874‑2347729 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |