| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2442690 = | 65 (0.730) | 4 (0.050) | 4/230 | NT | 6.3% | coding (1785/2610 nt) | topA | DNA topoisomerase I |
| ? | NC_002947 | 2442731 = | 58 (0.700) | coding (1826/2610 nt) | topA | DNA topoisomerase I | |||||
CAATCTCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2442844‑2442690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcggcCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC > NC_002947/2442731‑2442876 CAATCCCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGG > 1:612948/1‑150 AATCTCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGGATGTTGGTCATGGT > 1:866188/1‑150 AATCTCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACAACATTCCTTGCACGGAATGTTGGTCATGGT > 2:607063/1‑150 TCTCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGTCG > 1:707455/1‑150 AGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGT > 2:1603667/1‑95 AGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGT < 1:1603667/95‑1 AGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGT < 2:2676/84‑1 AGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGT > 1:2676/1‑84 CATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGG > 1:201330/1‑95 CATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGG < 2:201330/95‑1 CCACATTCCTTGCACGGAATGTTGGTCATGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCT < 2:1522381/83‑1 CCACATTCCTTGCACGGAATGTTGGTCATGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCT > 1:1522381/1‑83 CGGCCGATGATGATTCGCACCGCTTCTACGGTTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC < 1:1213385/150‑1 CGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC < 2:175278/150‑1 CGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC < 1:2297338/150‑1 CGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC < 2:602236/150‑1 GGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCG < 1:410213/140‑1 GGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCG > 2:410213/1‑140 CCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTA < 2:1566524/53‑1 CCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTA > 1:1566524/1‑53 CAATCTCGTCGCCCGGCACCAGGTTGACGGTAGCCTTGCAGCGCTCTTTCGGCGGCAGGCTGTAGCCAGAGCAACCCAGGAACACACCCGTAGAAGCGGTGCGAATCATCATCGGCCGACCACATTCCTTGCACGGAATGTTGGTCATGGTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2442844‑2442690‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcggcCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGGGCGAGTCGGAATCGCGC > NC_002947/2442731‑2442876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |