| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2456877 = | 118 (1.330) | 14 (0.200) | 9/194 | NT | 15.1% | intergenic (+85/‑96) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| ? | NC_002947 | 2456941 = | 65 (0.930) | intergenic (+149/‑32) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein | |||||
GACCACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457051‑2456877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaaGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGC > NC_002947/2456941‑2457089 GACCACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATC > 1:2215441/1‑150 cCCACCCTGGAGCGCCTGGGTGGGGCCTTGGTTGAAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCC > 1:936035/2‑150 CCACCCGGGAGCGCCTGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCT > 2:705682/1‑150 CCACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCT < 1:1427820/150‑1 CACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTG > 2:1384280/1‑150 CACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTG > 1:1367507/1‑150 CACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTG < 1:1384280/150‑1 ACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGT > 2:784097/1‑150 ACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGT < 1:1895315/150‑1 CCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTA < 2:1916913/150‑1 CCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCGGCTCCTACAGGGGCAGCGATAATCATGTAG > 1:1108488/1‑150 CAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGG > 2:2144270/1‑150 TCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGT > 2:2021199/1‑150 ctgGGGTGGGGCCTTGGTTGCAGGCGGTGGGTCGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTTCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTT < 2:1168388/147‑1 CAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTT > 2:1918710/1‑150 GGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAGCCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAC < 2:2142686/150‑1 GGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTAC < 2:388224/150‑1 GGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACC < 1:1702444/150‑1 GGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGC < 2:1782506/150‑1 GGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGA > 2:787546/1‑150 TTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG > 1:330445/1‑130 TTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG < 2:330445/130‑1 AATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG > 1:1684095/1‑107 AATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG < 2:1684095/107‑1 GGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG < 2:201131/79‑1 GGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGG > 1:201131/1‑79 AACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGG > 1:2019882/1‑150 CCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGC > 2:2272672/1‑150 CCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAC < 1:1135287/77‑1 CCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAC > 2:1135287/1‑77 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCTGCGAAGAGGCCAGCACCCCCAACCTAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGG > 2:1289643/1‑150 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGG > 2:1276903/1‑150 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTG > 2:829158/1‑80 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTG < 1:829158/80‑1 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGG < 2:1329674/59‑1 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGG > 1:1329674/1‑59 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAA > 1:1979443/1‑128 CTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAA < 2:1979443/128‑1 TACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGG > 1:286728/1‑150 GATAATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCAT < 1:1276903/150‑1 CCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAG > 1:2389978/1‑150 CCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAG > 2:1883483/1‑150 TGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCA < 1:872601/150‑1 GTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAG < 2:610725/150‑1 GAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTAC < 1:767758/150‑1 AGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACA < 1:1392904/150‑1 GTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGC > 1:1203990/1‑73 GTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGC < 2:1203990/73‑1 TTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCC > 1:1255284/1‑150 CCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTAC < 1:388224/150‑1 CCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCACCACCCTGGAGCGCCTGGGCGGTCCGACCATGGGCACCAGCTACCGCATCCAGTAC > 2:504810/1‑150 CCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCT < 1:81603/82‑1 CCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCT > 2:81603/1‑82 GCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGT > 1:2187413/1‑150 AGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCtgt < 1:1892395/150‑4 GACCACCCAGGCGCTCCAGGGTGGGGCCTTGGTTGCAGGCGGTGAGTAGCAGCAGAATGAACAGTAGGGCTGTGCGCACAGTAGGGTTTCTCGGTTGCCGGTGCTGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGTAGGAGCGGGTTTACCCGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2457051‑2456877‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggtttacccgcgaaGAGGCCAGCACCGGCAACCGAGAAACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAACCAAGGCCCCACCCTGGAGCGCCTGGGTGGTCCGACCATGGGCAGCAGCTACAGCATCCAGTACGTCCGC > NC_002947/2456941‑2457089 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |