New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2456877 =118 (1.330)14 (0.200) 9/194 NT 15.1% intergenic (+85/‑96) gapB/PP_2150 glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein
?NC_002947 2456941 = 65 (0.930)intergenic (+149/‑32) gapB/PP_2150 glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein

Only 100 of 152 total aligned reads displayed.

GCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAC  >  NC_002947/2456728‑2457020
                                                                                                                                                      |                                                                                                                                                 
gCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCtt                                                                                                                                                   <  1:720700/150‑1 (MQ=255)
  tGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTc                                                                                                                                                 >  2:1262580/1‑150 (MQ=255)
     acgtactggatgctgtagctgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTcgc                                                                                                                                               >  1:2187413‑M1/146‑150 (MQ=255)
      aGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCACG‑TTTTTTTTTATTCTGAATGTGTGTTGTCATTCCCGGCCCTTTTGCgg                                                                                                                                             >  2:2118423/1‑150 (MQ=255)
       gtactggatgctgtagctgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCgg                                                                                                                                             <  1:388224‑M1/7‑1 (MQ=255)
       gtactggatgcggtagctggtgcccatggtcggaccgcccaggcgctccagggtggtgccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCgg                                                                                                                                             >  2:504810‑M1/144‑150 (MQ=255)
        gtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGACGGCCCTTTCGCgggg                                                                                                                                           >  1:2144270/1‑149 (MQ=255)
         tggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTa                                                                                                                                          >  1:740480/1‑150 (MQ=255)
            ggatgctgtagctgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTaaa                                                                                                                                        >  1:1255284‑M1/139‑150 (MQ=255)
                     tGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGTCCCTTTCGCGGGTAAACACGCTC‑CTa                                                                                                                             >  2:936035/1‑150 (MQ=255)
                      ggAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTAc                                                                                                                            >  2:379120/1‑150 (MQ=255)
                       ctgctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTAc                                                                                                                            <  2:610725‑M1/23‑1 (MQ=255)
                        aaGACATGGCTGGTGTTAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTACTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAg                                                                                                                          <  2:2242880/150‑1 (MQ=255)
                        aaGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAg                                                                                                                          <  2:1636474/150‑1 (MQ=255)
                          gACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGa                                                                                                                        <  1:1459151/150‑1 (MQ=255)
                          ctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAgg                                                                                                                         >  1:2389978‑M1/125‑150 (MQ=255)
                          ctgcccatggtcggaccacccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAgg                                                                                                                         >  2:1883483‑M1/125‑150 (MQ=255)
                            cATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGACAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAACACCGCTC‑CTATAGAAta                                                                                                                      >  1:610725/1‑149 (MQ=255)
                                gCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCg                                                                                                                  >  1:1800122/1‑150 (MQ=255)
                                  tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCt                                                                                                                <  2:1382322/150‑1 (MQ=255)
                                  tGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCt                                                                                                                >  1:854101/1‑150 (MQ=255)
                                    gtgtGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGc                                                                                                              >  1:1332885/1‑150 (MQ=255)
                                     tgtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAACACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTACACGCGCTC‑CTACAGCATGATGGCTGcc                                                                                                             >  1:1982111/1‑150 (MQ=255)
                                      gtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGccc                                                                                                            <  2:854101/150‑1 (MQ=255)
                                           cccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGCAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTa                                                                                                       <  2:2329082/150‑1 (MQ=255)
                                            cccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTa                                                                                                       >  1:286728‑M1/107‑150 (MQ=255)
                                            ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCGGGATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAg                                                                                                      >  2:1287951/1‑150 (MQ=255)
                                             ccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAg                                                                                                      >  2:1276903‑M1/106‑150 (MQ=255)
                                             ccaggcgctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctaggttgggggtgctggcctcTTCGCAGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAg                                                                                                      >  2:1289643‑M1/106‑150 (MQ=255)
                                              atcAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGa                                                                                                                        >  1:1182435/3‑130 (MQ=255)
                                                   gctccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                                >  2:2272672‑M1/100‑150 (MQ=255)
                                                      ccagggtggggccttggttgcaggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGtt                                                                                             >  1:2019882‑M1/97‑150 (MQ=255)
                                                        ccACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAc                                                                                          <  1:1262580/150‑1 (MQ=255)
                                                         cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTAAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc                                                                                         >  2:2215441/1‑150 (MQ=255)
                                                          aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATc                                                                                                                   >  1:995698/1‑123 (MQ=255)
                                                            gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGt                                                                                              <  1:350657/142‑1 (MQ=255)
                                                            gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCcgc                                                                                      >  2:957433/1‑150 (MQ=255)
                                                              tGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCACGGGTAACCCCGATC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCTGCGa                                                                                    >  2:798943/1‑150 (MQ=255)
                                                               gATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAcc                                                                                                                                      >  1:1410229/1‑100 (MQ=255)
                                                                 ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCggg                                                                                               >  2:1814231/1‑136 (MQ=255)
                                                                 ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCggg                                                                                               <  1:1814231/136‑1 (MQ=255)
                                                                 ttCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTCCCCCTGTACGAGCTGGTTTACCCGCGAaga                                                                                 <  2:636592/150‑1 (MQ=255)
                                                                  tCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCGTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAagag                                                                                <  2:120214/150‑1 (MQ=255)
                                                                    gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAaga                                                                                 <  1:975037/147‑1 (MQ=255)
                                                                    gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                                                              <  2:1332885/150‑1 (MQ=255)
                                                                      ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCTGGTTTACCCGCGAAGAGGCCa                                                                            <  2:1454310/150‑1 (MQ=255)
                                                                      ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc                                                                                    <  1:139295/142‑3 (MQ=255)
                                                                      ttGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc                                                                                    >  2:139295/1‑140 (MQ=255)
                                                                           aggcggtgagtagcagcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCgg                                                                                                                                             >  2:81603‑M1/76‑82 (MQ=255)
                                                                           aGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCAc                                                                        <  1:498918/150‑1 (MQ=255)
                                                                             gCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACGCGCGAAGAGGCCAGCACCgg                                                                     >  1:787546/1‑150 (MQ=255)
                                                                              cAATGAAAAAACGGGAACCTTCGGTTTCCCT‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGc                                                                    <  1:1877426/150‑1 (MQ=255)
                                                                                 tGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAAc                                                                 <  1:624934/150‑1 (MQ=255)
                                                                                    aaaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCga                                                              <  2:740480/150‑1 (MQ=255)
                                                                                        aCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGa‑aa                                                         <  1:1356181/150‑1 (MQ=255)
                                                                                          gggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAcc                                                       >  1:28910/1‑150 (MQ=255)
                                                                                          gcagaatgaacagtagggctgtgcgcacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAAc                                                                                                                                       <  2:1203990‑M1/13‑1 (MQ=255)
                                                                                           ggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAccc                                                      >  1:1547178/1‑150 (MQ=255)
                                                                                             aaCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCACCAC‑GGATTATCGCTGCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa                                                    <  1:1975068/150‑1 (MQ=39)
                                                                                             aaCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa                                                    <  1:379120/150‑1 (MQ=255)
                                                                                                cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtg                                                 >  1:570831/1‑150 (MQ=255)
                                                                                                cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCAGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgctc                                                                                    <  2:338879/116‑3 (MQ=38)
                                                                                                 ttCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtgt                                                <  1:2129249/150‑1 (MQ=255)
                                                                                                 ttCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACtgt                                                >  1:1918710/1‑150 (MQ=255)
                                                                                                   cGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTgc                                              <  1:2359338/150‑1 (MQ=255)
                                                                                                                  tttttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTa                                                    <  1:2212809/130‑1 (MQ=255)
                                                                                                                   cacagtagggtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAg                                                                                                      <  1:829158‑M1/45‑1 (MQ=255)
                                                                                                                     ttATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTc                             <  2:2035852/150‑1 (MQ=255)
                                                                                                                        ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCt                                                                                                                <  2:2266592/65‑1 (MQ=255)
                                                                                                                        ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCt                                                                                                                >  1:2266592/1‑65 (MQ=255)
                                                                                                                        ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt                          >  2:1367507/1‑150 (MQ=255)
                                                                                                                        ttCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCAGGCAGGCACGCTC‑GTATAGGAGTATCGCTCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCAtt                          >  2:1892395/1‑150 (MQ=38)
                                                                                                                        ttCTGAATGTGTGTTGTCAGTGCCCGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGCGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTCCTGTGCGCACAGCCCTACTGTTCAtt                          <  2:1982111/150‑1 (MQ=255)
                                                                                                                           tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctg                       >  2:172692/1‑150 (MQ=255)
                                                                                                                           tGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctg                       >  2:547300/1‑150 (MQ=255)
                                                                                                                            gtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                                <  1:1135287‑M1/51‑1 (MQ=255)
                                                                                                                            gtttctcggttgccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                                >  2:1135287‑M1/27‑77 (MQ=255)
                                                                                                                            gAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                                >  2:154878/1‑77 (MQ=255)
                                                                                                                            gAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCgg                                                                                                <  1:154878/77‑1 (MQ=255)
                                                                                                                             aaTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACC‑AGATCGGCAGAGTGTGCGCACAGCCCTACTGTTCATTctgct                     >  2:1398804/1‑150 (MQ=37)
                                                                                                                              aTGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGc                                       <  2:2171420/131‑1 (MQ=255)
                                                                                                                                 tgtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTa                 >  2:1032554/1‑150 (MQ=255)
                                                                                                                                  gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGC‑AAccc                                                      <  2:93190/112‑1 (MQ=255)
                                                                                                                                  gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AAccc                                                      >  1:93190/1‑112 (MQ=255)
                                                                                                                                  gtgtTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTctgc                      >  2:981440/1‑144 (MQ=255)
                                                                                                                                   tgttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc                                                                                         <  1:93427/77‑1 (MQ=255)
                                                                                                                                     ttgtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTCTCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCa             >  1:784097/1‑150 (MQ=255)
                                                                                                                                       gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc                                                                                      <  2:356283/76‑1 (MQ=25)
                                                                                                                                       gtCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTAAACCcgc                                                                                      >  1:356283/1‑76 (MQ=255)
                                                                                                                                        tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTAcc                                                                                         <  1:2249435/72‑1 (MQ=255)
                                                                                                                                        tCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGGTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCg          >  1:1462321/1‑150 (MQ=255)
                                                                                                                                        ccggtgctggcctcTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAg                                                                                                      <  2:1329674‑M1/45‑1 (MQ=255)
                                                                                                                                         cAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGc         <  2:1547178/150‑1 (MQ=255)
                                                                                                                                           gTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGtt                              <  1:1287249/127‑1 (MQ=255)
                                                                                                                                               cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCg                                                                      >  2:1444845/1‑84 (MQ=255)
                                                                                                                                               cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCGTACTGTTCATTCTGCTTCTATTCACCGCCCGCaa   >  2:1108488/1‑150 (MQ=255)
                                                                                                                                               cGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGACAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCaa   <  1:2090705/150‑1 (MQ=255)
                                                                                                                                                ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc  >  2:767758/1‑150 (MQ=255)
                                                                                                                                                ggCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAc  <  1:1294114/150‑1 (MQ=255)
                                                                                                                                                 gCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCgg                                                                     >  1:1884523/1‑83 (MQ=255)
                                                                                                                                                      |                                                                                                                                                 
GCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTC‑CTACAGGATTATCGCTGCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACCGGCAACCGAGA‑AACCCTACTGTGCGCACAGCCCTACTGTTCATTCTGCTGCTACTCACCGCCTGCAAC  >  NC_002947/2456728‑2457020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.