| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2755117 = | 85 (0.960) | 10 (0.120) | 10/232 | NT | 11.6% | coding (1400/3147 nt) | czcA‑II | cation efflux system protein |
| ? | NC_002947 | 2755142 = | 73 (0.870) | coding (1425/3147 nt) | czcA‑II | cation efflux system protein | |||||
CACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2755271‑2755117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcaaGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCAGC > NC_002947/2755142‑2755290 CACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AG > 2:1898072/1‑150 ACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAACGGCCATCGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGG < 1:1319464/150‑1 ACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGG < 1:1345855/150‑1 ACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGG < 2:1637579/150‑1 CCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGG < 2:1321256/150‑1 GCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCT‑GACCGGGGTCGAGGGCAAG > 1:965514/1‑150 GCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCT‑GACCGGGGTCGAGGGCAAG < 1:257330/150‑1 TTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCT‑GACCGGGGTCGAGGGCAAGATG < 2:1691091/150‑1 TTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCT‑GACCGGGGTCGAGGGCAAGATGTTCCAC < 2:965514/150‑1 CTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGGCAAGATG < 2:876417/109‑1 CTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGGCAAGATG > 1:876417/1‑109 AAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGG < 2:1358991/81‑1 AAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGG > 1:1358991/1‑81 CATCTTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGT < 1:1534164/59‑1 CATCTTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGT > 2:1534164/1‑59 TTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGT > 2:1107224/1‑117 TTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGT < 1:1107224/117‑1 TTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGT > 2:1462111/1‑117 TTGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGT < 1:1462111/117‑1 TGCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCT > 1:1688889/1‑150 GCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGA > 2:1275586/1‑73 GCCCTCGACCCCGGTC‑AGGGCAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGA < 1:1275586/73‑1 CAAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCA > 1:720643/1‑150 AAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCAG > 2:1826753/1‑150 AAGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCAG > 2:2255480/1‑150 AGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCAGC < 2:257330/150‑1 CACCAGGCCTTCCTCTTCCTTGACCTTGCCGGTGACGAACAGGGCAATGGCTGCCGGAACGAACGTGACCGAAAGGATCATCGCGCCCAACAGGGCCATGACCACGGTAAAGGCCATAGGGTGGAACATCTTGCCCTCGACCCCGGTC‑AGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2755271‑2755117‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agggcaaGATGTTCCACCCTATGGCCTTTACCGTGGTCATGGCCCTGTTGGGCGCGATGATCCTTTCGGTCACGTTCGTTCCGGCAGCCATTGCCCTGTTCGTCACCGGCAAGGTCAAGGAAGAGGAAGGCCTGGTGATGCGTACGGCACGGCAGC > NC_002947/2755142‑2755290 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |